SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001002258
Gene Symbol: ATP5G3
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.175178329T>C COSM4775480 SJHYPO013 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][acute_lymphoblastic_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4428 gggTCTCCTTtgttt CAAGGAGA m7b Created HHKTA_42895_NM_001002258|628|667|1.75235161259616|3.18397658831345
hsa-miR-4311 gggTCTCTTTtgttt GAAAGAGA m7b Disrupted HHKTA_42895_NM_001002258|628|667|1.75235161259616|3.18397658831345

Mutation Mutation ID Sample Name Cancer Type
chr2:g.175178163A>C COSN9117402 AOCS-128-1-0 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-203a-3p tCATTTCAttaaaga GUGAAAUG m7b Disrupted HHKTA_5871_NM_001002258|792|831|10.8169852629393|3.18397658831345
hsa-miR-4477b tcattTCCTTAAaga AUUAAGGA m7b Created HHKTA_5871_NM_001002258|792|831|10.8169852629393|3.18397658831345
hsa-miR-5093 tCATTTCCTtaaaga AGGAAAUG m8a (m7a->m8a) HHKTA_5871_NM_001002258|792|831|10.8169852629393|3.18397658831345
hsa-miR-651-3p tcaTTTCCTTaaaga AAAGGAAA m7b Created HHKTA_5871_NM_001002258|792|831|10.8169852629393|3.18397658831345
hsa-miR-7856-5p tcatttCCTTAAAga UUUUAAGG m7b Created HHKTA_5871_NM_001002258|792|831|10.8169852629393|3.18397658831345

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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