SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001002030
Gene Symbol: ECHDC1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.127290127AT>T COSM1440279 TCGA-AA-3492-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-153-5p tcaAAAAATGctctaa UCAUUUUU m7b Disrupted HHKTA_37500_NM_001002030|898|937|2.03359322943258|1.61466004094929

Mutation Mutation ID Sample Name Cancer Type
chr6:g.127290124T>C COSM3366285 TCGA-AK-3445-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1296-5p aaaatGCCCTAAaca UUAGGGCC m7a Created HHKTA_37500_NM_001002030|898|937|2.03359322943258|1.61466004094929
hsa-miR-2278 aaaaTGCTCTaaaca GAGAGCAG m6b Disrupted HHKTA_37500_NM_001002030|898|937|2.03359322943258|1.61466004094929
hsa-miR-2909 aaaatGCCCTAAaca GUUAGGGC m7b Created HHKTA_37500_NM_001002030|898|937|2.03359322943258|1.61466004094929
hsa-miR-3945 aaaATGCCCTaaaca AGGGCAUA m7a Created HHKTA_37500_NM_001002030|898|937|2.03359322943258|1.61466004094929
hsa-miR-4253 aaaATGCCCTaaaca AGGGCAUG m7a Created HHKTA_37500_NM_001002030|898|937|2.03359322943258|1.61466004094929
hsa-miR-4436b-3p aaaaTGCCCTaaaca CAGGGCAG m6b Created HHKTA_37500_NM_001002030|898|937|2.03359322943258|1.61466004094929
hsa-miR-4632-5p aaaaTGCCCTaaaca GAGGGCAG m6b Created HHKTA_37500_NM_001002030|898|937|2.03359322943258|1.61466004094929
hsa-miR-4761-3p aaaATGCCCTaaaca GAGGGCAU m7b Created HHKTA_37500_NM_001002030|898|937|2.03359322943258|1.61466004094929
hsa-miR-6735-5p aaaaTGCCCTaaaca CAGGGCAG m6b Created HHKTA_37500_NM_001002030|898|937|2.03359322943258|1.61466004094929
hsa-miR-6879-5p aaaaTGCCCTaaaca CAGGGCAG m6b Created HHKTA_37500_NM_001002030|898|937|2.03359322943258|1.61466004094929
hsa-miR-7843-5p aaaaTGCCCTaaaca GAGGGCAG m6b Created HHKTA_37500_NM_001002030|898|937|2.03359322943258|1.61466004094929

Mutation Mutation ID Sample Name Cancer Type
chr6:g.127289745T>G COSN1324631 HCC98T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-132-3p acttACTGTTAatca UAACAGUC m7a Created HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-212-3p acttACTGTTAatca UAACAGUC m7a Created HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548a-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548ab acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548ad-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548ae-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548ak acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548am-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548ap-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548aq-5p acTTACTTTtaatca GAAAGUAA m7b (m7b->m6b) HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548ar-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548as-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548au-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548av-5p actTACTTTTaatca AAAAGUAC m7a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548ay-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548az-5p acttACTTTTaatca CAAAAGUG m6b Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548b-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548bb-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548c-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548d-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548h-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548i acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548j-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548k actTACTTTTaatca AAAAGUAC m7a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548l actTACTTTTaatca AAAAGUAU m7a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548n actTACTTTTaatca CAAAAGUA m7b Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548o-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548t-5p acttACTTTTaatca CAAAAGUG m6b Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548w acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548y acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-559 acTTACTTTtaatca UAAAGUAA m7b (m7b->m6b) HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-132-3p acttACTGTTAatca UAACAGUC m7a Created HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-212-3p acttACTGTTAatca UAACAGUC m7a Created HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548a-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548ab acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548ad-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548ae-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548ak acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548am-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548ap-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548aq-5p acTTACTTTtaatca GAAAGUAA m7b (m7b->m6b) HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548ar-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548as-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548au-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548av-5p actTACTTTTaatca AAAAGUAC m7a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548ay-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548az-5p acttACTTTTaatca CAAAAGUG m6b Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548b-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548bb-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548c-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548d-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548h-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548i acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548j-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548k actTACTTTTaatca AAAAGUAC m7a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548l actTACTTTTaatca AAAAGUAU m7a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548n actTACTTTTaatca CAAAAGUA m7b Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548o-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548t-5p acttACTTTTaatca CAAAAGUG m6b Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548w acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548y acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-559 acTTACTTTtaatca UAAAGUAA m7b (m7b->m6b) HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-132-3p acttACTGTTAatca UAACAGUC m7a Created HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-212-3p acttACTGTTAatca UAACAGUC m7a Created HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548a-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548ab acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548ad-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548ae-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548ak acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548am-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548ap-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548aq-5p acTTACTTTtaatca GAAAGUAA m7b (m7b->m6b) HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548ar-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548as-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548au-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548av-5p actTACTTTTaatca AAAAGUAC m7a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548ay-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548az-5p acttACTTTTaatca CAAAAGUG m6b Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548b-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548bb-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548c-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548d-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548h-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548i acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548j-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548k actTACTTTTaatca AAAAGUAC m7a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548l actTACTTTTaatca AAAAGUAU m7a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548n actTACTTTTaatca CAAAAGUA m7b Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548o-5p acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548t-5p acttACTTTTaatca CAAAAGUG m6b Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548w acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-548y acTTACTTTTaatca AAAAGUAA m8a Disrupted HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929
hsa-miR-559 acTTACTTTtaatca UAAAGUAA m7b (m7b->m6b) HHKTA_19785_NM_001002030|1282|1321|3.67777498939936|1.61466004094929

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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