SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001002020
Gene Symbol: PUS1

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr12:g.131929767G>C COSM1322645 TCGA-13-0760-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr12:g.131929755C>A COSM4719483 T2932 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4671-5p tgggagcCTTCGGac ACCGAAGA m6b Disrupted HHHNE_14743_PUS1|NM_025215|exon_CDS|-4.40071655499553|-0.237840283349134

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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