SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001001992
Gene Symbol: USP16

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr21:g.29047098T>C COSM3972732 TCGA-HT-7884-01 [central_nervous_system][brain][glioma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-382-3p ttctGAATGATagtc AAUCAUUC m7b Disrupted HHRBL_9283_BCBL1-2of3-SCL_8602
hsa-miR-382-3p ttctGAATGATagtc AAUCAUUC m7b Disrupted HHRBL_9283_BCBL1-2of3-SCL_8602

Mutation Mutation ID Sample Name Cancer Type
chr21:g.29047067A>G COSM345170 LUAD-S01315 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4709-3p gCTCTTCAtcctgat UUGAAGAG m7b Disrupted HHRBL_9283_BCBL1-2of3-SCL_8602
hsa-miR-4436a gctcttcGTCCTGat GCAGGACA m6b Created HHRBL_9283_BCBL1-2of3-SCL_8602
hsa-miR-1265 gctcttCATCCTGat CAGGAUGU m7a Disrupted HHRBL_9283_BCBL1-2of3-SCL_8602

Mutation Mutation ID Sample Name Cancer Type
chr21:g.29047051T>G COSM1029765 TCGA-AX-A05Z-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-32-3p cCTAAATTtgaatgc CAAUUUAG m7b Disrupted HHRBL_9283_BCBL1-2of3-SCL_8602
hsa-miR-23c cctaAATGTGAatgc AUCACAUU m7b Created HHRBL_9283_BCBL1-2of3-SCL_8602
hsa-miR-23b-3p cctaAATGTGAatgc AUCACAUU m7b Created HHRBL_9283_BCBL1-2of3-SCL_8602
hsa-miR-23a-3p cctaAATGTGAatgc AUCACAUU m7b Created HHRBL_9283_BCBL1-2of3-SCL_8602
hsa-miR-130a-5p cctaAATGTGAAtgc UUCACAUU m8a Created HHRBL_9283_BCBL1-2of3-SCL_8602
hsa-miR-3671 cctaaATTTGAatgc AUCAAAUA m6b Disrupted HHRBL_9283_BCBL1-2of3-SCL_8602
hsa-miR-607 cctaaATTTGAAtgc GUUCAAAU m7b Disrupted HHRBL_9283_BCBL1-2of3-SCL_8602

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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