SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001001992
Gene Symbol: USP16

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr21:g.29047167T>G COSM4430478 408 [haematopoietic_and_lymphoid_tissue][lymph_node][lymphoid_neoplasm][mantle_cell_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4696 tctgtacTCTTGCAa UGCAAGAC m7a Disrupted HHHNE_20463_USP16|NM_001001992|exon_CDS|-7.18576580793878|0.328810713802211
hsa-miR-4696 tctgtacTCTTGCAa UGCAAGAC m7a Disrupted HHHNE_20463_USP16|NM_001001992|exon_CDS|-7.18576580793878|0.328810713802211

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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