SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001001791
Gene Symbol: C10orf55

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.73917369G>T COSN1500403 RK037_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7158-3p tagccTAGTTCAtcc CUGAACUA m7b Disrupted HHSJI_330_Peak36139|17|0.3488|4|NM_002658|PLAU
hsa-miR-7158-3p tagccTAGTTCAtcc CUGAACUA m7b Disrupted HHSJI_330_Peak36139|17|0.3488|4|NM_002658|PLAU

Mutation Mutation ID Sample Name Cancer Type
chr10:g.73917094T>G COSN10072536 C0007T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1227-3p gtatgtTGGCACact CGUGCCAC m6b Created HHSJI_329_Peak40396|9|0.1395|3|NM_002658|PLAU
hsa-miR-19a-3p gtatgTTTGCACAct UGUGCAAA m8a Disrupted HHSJI_329_Peak40396|9|0.1395|3|NM_002658|PLAU
hsa-miR-19b-3p gtatgTTTGCACAct UGUGCAAA m8a Disrupted HHSJI_329_Peak40396|9|0.1395|3|NM_002658|PLAU
hsa-miR-548aw gtatgTTTGCACact GUGCAAAA m7a Disrupted HHSJI_329_Peak40396|9|0.1395|3|NM_002658|PLAU

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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