SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001001790
Gene Symbol: TOMM5

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.37592455C>T COSM3763933 TCGA-AM-5820-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3150b-3p tgaTCTCCTCcatac UGAGGAGA m7b Disrupted HPRO6_77593_G93050.1_37592425
hsa-miR-4683 tGATCTCCtccatac UGGAGAUC m7b Disrupted HPRO6_77593_G93050.1_37592425
hsa-miR-4784 tgaTCTCCTCcatac UGAGGAGA m7b Disrupted HPRO6_77593_G93050.1_37592425
hsa-miR-4802-5p tgatctCCTCCATAc UAUGGAGG m8a Disrupted HPRO6_77593_G93050.1_37592425
hsa-miR-6077 tgatCTCTTCCatac GGGAAGAG m7b Created HPRO6_77593_G93050.1_37592425
hsa-miR-6888-5p tgATCTCCTccatac AAGGAGAU m7b (m7b->m6b) HPRO6_77593_G93050.1_37592425
hsa-miR-6894-5p tgatcTCCTCCatac AGGAGGAU m6b Disrupted HPRO6_77593_G93050.1_37592425
hsa-miR-7154-3p tgatcTCCTCCatac AGGAGGAC m6b Disrupted HPRO6_77593_G93050.1_37592425
hsa-miR-765 tgatCTCCTCCAtac UGGAGGAG m8a Disrupted HPRO6_77593_G93050.1_37592425
hsa-miR-766-5p tgatcTCCTCCatac AGGAGGAA m6b Disrupted HPRO6_77593_G93050.1_37592425
hsa-miR-3150b-3p tgaTCTCCTCcatac UGAGGAGA m7b Disrupted HPRO6_77593_G93050.1_37592425
hsa-miR-4683 tGATCTCCtccatac UGGAGAUC m7b Disrupted HPRO6_77593_G93050.1_37592425
hsa-miR-4784 tgaTCTCCTCcatac UGAGGAGA m7b Disrupted HPRO6_77593_G93050.1_37592425
hsa-miR-4802-5p tgatctCCTCCATAc UAUGGAGG m8a Disrupted HPRO6_77593_G93050.1_37592425
hsa-miR-6077 tgatCTCTTCCatac GGGAAGAG m7b Created HPRO6_77593_G93050.1_37592425
hsa-miR-6888-5p tgATCTCCTccatac AAGGAGAU m7b (m7b->m6b) HPRO6_77593_G93050.1_37592425
hsa-miR-6894-5p tgatcTCCTCCatac AGGAGGAU m6b Disrupted HPRO6_77593_G93050.1_37592425
hsa-miR-7154-3p tgatcTCCTCCatac AGGAGGAC m6b Disrupted HPRO6_77593_G93050.1_37592425
hsa-miR-765 tgatCTCCTCCAtac UGGAGGAG m8a Disrupted HPRO6_77593_G93050.1_37592425
hsa-miR-766-5p tgatcTCCTCCatac AGGAGGAA m6b Disrupted HPRO6_77593_G93050.1_37592425

Mutation Mutation ID Sample Name Cancer Type
chr9:g.37592445A>G COSM340841 LUAD-F00365 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6507-3p catacgGGACTTTct CAAAGUCC m7b Created HPRO6_77593_G93050.1_37592425

Mutation Mutation ID Sample Name Cancer Type
chr9:g.37592444A>G COSM1268302 ESO-536 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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