SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001001665
Gene Symbol: CYP27C1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.127203477G>T COSM1006168 TCGA-BS-A0UF-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-95-5p caaccaaTTTATTGc UCAAUAAA m7b Created HHFKP_77542_uc002tod.2_3_167
Mutation Mutation ID Sample Name Cancer Type
chr2:g.127203476T>A COSM715940 TCGA-60-2726-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr2:g.127203455G>A COSM4563133 CSCC-5-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-376a-5p attaaaaGAATCTAc GUAGAUUC m7b Disrupted HHFKP_77542_uc002tod.2_3_167

Mutation Mutation ID Sample Name Cancer Type
chr2:g.127203445C>T COSM3566073 TCGA-ER-A1A1-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6770-5p tctaCCTTCTCAgga UGAGAAGG m8a Created HHFKP_77542_uc002tod.2_3_167
hsa-miR-6858-5p tctacCTCCTCAgga GUGAGGAG m7b Disrupted HHFKP_77542_uc002tod.2_3_167
hsa-miR-98-5p tCTACCTCctcagga UGAGGUAG m7b Disrupted HHFKP_77542_uc002tod.2_3_167
hsa-miR-4329 tctacctTCTCAGGa CCUGAGAC m7a Created HHFKP_77542_uc002tod.2_3_167
hsa-miR-4324 tctacctTCTCAGGa CCCUGAGA m7b Created HHFKP_77542_uc002tod.2_3_167
hsa-miR-4251 tctaccTTCTCAGGa CCUGAGAA m8a Created HHFKP_77542_uc002tod.2_3_167
hsa-miR-1253 tctacCTTCTCagga AGAGAAGA m6b Created HHFKP_77542_uc002tod.2_3_167
hsa-miR-544b tctacctCCTCAGGa ACCUGAGG m7b Disrupted HHFKP_77542_uc002tod.2_3_167
hsa-miR-4689 tctacCTCCTCAgga UUGAGGAG m7b Disrupted HHFKP_77542_uc002tod.2_3_167
hsa-miR-4500 tCTACCTCctcagga UGAGGUAG m7b Disrupted HHFKP_77542_uc002tod.2_3_167
hsa-miR-4458 tCTACCTCctcagga AGAGGUAG m7b Disrupted HHFKP_77542_uc002tod.2_3_167

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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