SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001001655
Gene Symbol: ALKBH2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.109088289T>C COSM1946043 Gp5D [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1263 gcactGGTACCAcag AUGGUACC m7b Disrupted HHFKP_33231_cluster-5752_1_40

Mutation Mutation ID Sample Name Cancer Type
chr12:g.109088284C>T COSM1244842 ESO-0280 [oesophagus][lower_third][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1263 GGTACCATagtcttc AUGGUACC m8a Created HHFKP_33231_cluster-5752_1_40
hsa-miR-4318 ggtaCCACAGTcttc CACUGUGG m7b Disrupted HHFKP_33231_cluster-5752_1_40
hsa-miR-5579-5p gGTACCATAgtcttc UAUGGUAC m8a (m7a->m8a) HHFKP_33231_cluster-5752_1_40

Mutation Mutation ID Sample Name Cancer Type
chr12:g.109088283A>C COSM4935568 TCGA-ED-A459-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4318 gtaCCACAGTcttcc CACUGUGG m7b Disrupted HHFKP_33231_cluster-5752_1_40

Mutation Mutation ID Sample Name Cancer Type
chr12:g.109088275C>T COSM1298876 TCGA-DK-A1AC-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-342-3p gtcttccTGTGAGAa UCUCACAC m7a Created HHFKP_33231_cluster-5752_1_40
hsa-miR-4681 gtcTTCCCGTgagaa AACGGGAA m7b Disrupted HHFKP_33231_cluster-5752_1_40
hsa-miR-4700-3p gtctTCCTGTGagaa CACAGGAC m7a Created HHFKP_33231_cluster-5752_1_40
hsa-miR-513a-5p gtcttCCTGTGAgaa UUCACAGG m7b Created HHFKP_33231_cluster-5752_1_40

Mutation Mutation ID Sample Name Cancer Type
chr12:g.109088267A>T COSM1293455 TCGA-DS-A1OC-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1248 gtgagaAAGAAGGTt ACCUUCUU m8a Disrupted HHFKP_33231_cluster-5752_1_40
hsa-miR-205-5p gtgagaATGAAGGtt UCCUUCAU m7b Created HHFKP_33231_cluster-5752_1_40

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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