SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001001563
Gene Symbol: TIMM50

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.39485598G>A COSM390558 LUAD_E01147 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4421 gattatAGACAGGTg ACCUGUCU m8a Disrupted HPRT3_12728_G16848.1_39976232
hsa-miR-5699-3p gattatAGACAGGtg UCCUGUCU m7b Disrupted HPRT3_12728_G16848.1_39976232
hsa-miR-4796-5p gatTATAGACAggtg UGUCUAUA m8a Disrupted HPRT3_12728_G16848.1_39976232
hsa-miR-374a-5p gATTATAAacaggtg UUAUAAUA m7a Created HPRT3_12728_G16848.1_39976232

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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