SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001001433
Gene Symbol: STX16
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr20:g.58652000G>A COSN527328 TCGA-80-5607-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6511a-3p gcaaagGGTGAGaca CCUCACCA m6b Disrupted HHHNE_18279_STX16|NM_001134773|exon_utr5|-6.34952377904539|0.2120603828924
hsa-miR-4793-5p gcaaAGGATGagaca ACAUCCUG m6b Created HHHNE_18279_STX16|NM_001134773|exon_utr5|-6.34952377904539|0.2120603828924
hsa-miR-501-5p gcAAAGGATgagaca AAUCCUUU m7b (m6b->m7b) HHHNE_18279_STX16|NM_001134773|exon_utr5|-6.34952377904539|0.2120603828924
hsa-miR-6511b-3p gcaaagGGTGAGaca CCUCACCA m6b Disrupted HHHNE_18279_STX16|NM_001134773|exon_utr5|-6.34952377904539|0.2120603828924
hsa-miR-6784-3p gcaaaGGGTGAGAca UCUCACCC m8a Disrupted HHHNE_18279_STX16|NM_001134773|exon_utr5|-6.34952377904539|0.2120603828924
hsa-miR-6862-3p gcaaaGGGTGAGaca CCUCACCC m7b Disrupted HHHNE_18279_STX16|NM_001134773|exon_utr5|-6.34952377904539|0.2120603828924
hsa-miR-6865-3p gcaaAGGGTGagaca ACACCCUC m6b Disrupted HHHNE_18279_STX16|NM_001134773|exon_utr5|-6.34952377904539|0.2120603828924
hsa-miR-6870-3p gcaaaGGATGAGaca GCUCAUCC m7b Created HHHNE_18279_STX16|NM_001134773|exon_utr5|-6.34952377904539|0.2120603828924
hsa-miR-1229-3p gcaaagGGTGAGAca CUCUCACC m7b Disrupted HHHNE_18279_STX16|NM_001134773|exon_utr5|-6.34952377904539|0.2120603828924

Mutation Mutation ID Sample Name Cancer Type
chr20:g.58651719G>T COSN2522082
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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