SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001001132
Gene Symbol: ITSN1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr21:g.33794367A>G COSM4101400 TCGA-HU-A4HD-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-744-3p ataaGCAACAactcc CUGUUGCC m6b Disrupted HPKTA_39238_G42202.1_35166669
hsa-miR-744-3p ataaGCAACAactcc CUGUUGCC m6b Disrupted HPKTA_39238_G42202.1_35166669
hsa-miR-744-3p ataaGCAACAactcc CUGUUGCC m6b Disrupted HPKTA_39238_G42202.1_35166669

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33794358C>A COSM3731661 254 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3149 aaATACAAAataagc UUUGUAUG m7a (m6a->m7a) HPKTA_39238_G42202.1_35166669
hsa-miR-3149 aaATACAAAataagc UUUGUAUG m7a (m6a->m7a) HPKTA_39238_G42202.1_35166669
hsa-miR-3149 aaATACAAAataagc UUUGUAUG m7a (m6a->m7a) HPKTA_39238_G42202.1_35166669

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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