SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001001132
Gene Symbol: ITSN1

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33837612T>C COSN2522148
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr21:g.33797510A>G COSM220441 DLBCL-PatientL [haematopoietic_and_lymphoid_tissue][lymph_node][lymphoid_neoplasm][diffuse_large_B_cell_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1238-3p ggCGAGGAAaaaggc CUUCCUCG m7b (m7b->m6b) HHHNE_8977_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-4446-5p ggcgAGGGAAAaggc AUUUCCCU m7b Created HHHNE_8977_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-4655-3p ggCGAGGGaaaaggc ACCCUCGU m6b Created HHHNE_8977_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-4755-5p ggcgAGGGAAAaggc UUUCCCUU m7a Created HHHNE_8977_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-5006-3p ggcgAGGGAAAaggc UUUCCCUU m7a Created HHHNE_8977_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-642a-5p ggcGAGGGAaaaggc GUCCCUCU m6b Created HHHNE_8977_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-670-3p ggcGAGGAAAaaggc UUUCCUCA m7a Disrupted HHHNE_8977_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-6803-3p gGCGAGGGAaaaggc UCCCUCGC m8a (m7a->m8a) HHHNE_8977_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33797509GA>G COSM4746961 pfg057T [stomach][NS][carcinoma][intestinal_adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1238-3p tggCGAGGAAaaaggc CUUCCUCG m7b Disrupted HHHNE_8977_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-670-3p tggcGAGGAAAaaggc UUUCCUCA m7a Disrupted HHHNE_8977_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-1238-3p tggCGAGGAAaaaggc CUUCCUCG m7b Disrupted HHHNE_8977_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-670-3p tggcGAGGAAAaaggc UUUCCUCA m7a Disrupted HHHNE_8977_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-1238-3p tggCGAGGAAaaaggc CUUCCUCG m7b Disrupted HHHNE_8977_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-670-3p tggcGAGGAAAaaggc UUUCCUCA m7a Disrupted HHHNE_8977_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33797505C>T COSM3693777 TCGA-AM-5821-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1238-3p aggatggCGAGGAAa CUUCCUCG m7b Disrupted HHHNE_8976_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-6511a-3p aggaTGGTGAGGaaa CCUCACCA m8a Created HHHNE_8976_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-6511b-3p aggaTGGTGAGGaaa CCUCACCA m8a Created HHHNE_8976_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-670-3p aggatggTGAGGAAa UUUCCUCA m7b Created HHHNE_8976_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-6862-3p aggatGGTGAGGaaa CCUCACCC m7a Created HHHNE_8976_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-1238-3p aggatggCGAGGAAa CUUCCUCG m7b Disrupted HHHNE_8977_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-6511a-3p aggaTGGTGAGGaaa CCUCACCA m8a Created HHHNE_8977_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-6511b-3p aggaTGGTGAGGaaa CCUCACCA m8a Created HHHNE_8977_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-670-3p aggatggTGAGGAAa UUUCCUCA m7b Created HHHNE_8977_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-6862-3p aggatGGTGAGGaaa CCUCACCC m7a Created HHHNE_8977_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-1238-3p aggatggCGAGGAAa CUUCCUCG m7b Disrupted HHHNE_8976_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-6511a-3p aggaTGGTGAGGaaa CCUCACCA m8a Created HHHNE_8976_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-6511b-3p aggaTGGTGAGGaaa CCUCACCA m8a Created HHHNE_8976_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-670-3p aggatggTGAGGAAa UUUCCUCA m7b Created HHHNE_8976_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-6862-3p aggatGGTGAGGaaa CCUCACCC m7a Created HHHNE_8976_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-1238-3p aggatggCGAGGAAa CUUCCUCG m7b Disrupted HHHNE_8977_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-6511a-3p aggaTGGTGAGGaaa CCUCACCA m8a Created HHHNE_8977_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-6511b-3p aggaTGGTGAGGaaa CCUCACCA m8a Created HHHNE_8977_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-670-3p aggatggTGAGGAAa UUUCCUCA m7b Created HHHNE_8977_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-6862-3p aggatGGTGAGGaaa CCUCACCC m7a Created HHHNE_8977_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-1238-3p aggatggCGAGGAAa CUUCCUCG m7b Disrupted HHHNE_8976_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-6511a-3p aggaTGGTGAGGaaa CCUCACCA m8a Created HHHNE_8976_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-6511b-3p aggaTGGTGAGGaaa CCUCACCA m8a Created HHHNE_8976_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-670-3p aggatggTGAGGAAa UUUCCUCA m7b Created HHHNE_8976_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-6862-3p aggatGGTGAGGaaa CCUCACCC m7a Created HHHNE_8976_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-1238-3p aggatggCGAGGAAa CUUCCUCG m7b Disrupted HHHNE_8977_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-6511a-3p aggaTGGTGAGGaaa CCUCACCA m8a Created HHHNE_8977_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-6511b-3p aggaTGGTGAGGaaa CCUCACCA m8a Created HHHNE_8977_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-670-3p aggatggTGAGGAAa UUUCCUCA m7b Created HHHNE_8977_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514
hsa-miR-6862-3p aggatGGTGAGGaaa CCUCACCC m7a Created HHHNE_8977_ITSN1|NM_001001132|exon_CDS|-5.67949295387469|1.16763573917514

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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