SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001001132
Gene Symbol: ITSN1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr21:g.33837723A>G COSN8611704 J38_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4517 taaTCATATTgcatt AAAUAUGA m7b Disrupted HHFKP_91827_cluster-14899_11_116
Mutation Mutation ID Sample Name Cancer Type
chr21:g.33837612T>C COSN2522148
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr21:g.33772096C>T COSM4295811 Gp5D [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-181a-5p cttTGAATGTggcaa AACAUUCA m7b Created HHFKP_91823_cluster-14899_7_10
hsa-miR-181b-5p cttTGAATGTggcaa AACAUUCA m7b Created HHFKP_91823_cluster-14899_7_10
hsa-miR-181c-5p cttTGAATGTggcaa AACAUUCA m7b Created HHFKP_91823_cluster-14899_7_10
hsa-miR-181d-5p cttTGAATGTggcaa AACAUUCA m7b Created HHFKP_91823_cluster-14899_7_10
hsa-miR-3064-3p ctttgaaTGTGGCAa UUGCCACA m7b Created HHFKP_91823_cluster-14899_7_10
hsa-miR-4262 cttTGAATGTggcaa GACAUUCA m7b Created HHFKP_91823_cluster-14899_7_10
hsa-miR-181a-5p cttTGAATGTggcaa AACAUUCA m7b Created HHFKP_91823_cluster-14899_7_10
hsa-miR-181b-5p cttTGAATGTggcaa AACAUUCA m7b Created HHFKP_91823_cluster-14899_7_10
hsa-miR-181c-5p cttTGAATGTggcaa AACAUUCA m7b Created HHFKP_91823_cluster-14899_7_10
hsa-miR-181d-5p cttTGAATGTggcaa AACAUUCA m7b Created HHFKP_91823_cluster-14899_7_10
hsa-miR-3064-3p ctttgaaTGTGGCAa UUGCCACA m7b Created HHFKP_91823_cluster-14899_7_10
hsa-miR-4262 cttTGAATGTggcaa GACAUUCA m7b Created HHFKP_91823_cluster-14899_7_10
hsa-miR-181a-5p cttTGAATGTggcaa AACAUUCA m7b Created HHFKP_91823_cluster-14899_7_10
hsa-miR-181b-5p cttTGAATGTggcaa AACAUUCA m7b Created HHFKP_91823_cluster-14899_7_10
hsa-miR-181c-5p cttTGAATGTggcaa AACAUUCA m7b Created HHFKP_91823_cluster-14899_7_10
hsa-miR-181d-5p cttTGAATGTggcaa AACAUUCA m7b Created HHFKP_91823_cluster-14899_7_10
hsa-miR-3064-3p ctttgaaTGTGGCAa UUGCCACA m7b Created HHFKP_91823_cluster-14899_7_10
hsa-miR-4262 cttTGAATGTggcaa GACAUUCA m7b Created HHFKP_91823_cluster-14899_7_10

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33772065G>C COSM478543 TCGA-B0-5709-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548m aagtaACCTTTGaag CAAAGGUA m7a Created HHFKP_91823_cluster-14899_7_10
hsa-miR-6715b-3p aagtaacGTTTGAag CUCAAACC m6b Disrupted HHFKP_91823_cluster-14899_7_10

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33772064C>T COSM1211178 587228 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-323a-3p gaaGTAATGTttgaa CACAUUAC m7b Created HHFKP_91823_cluster-14899_7_10

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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