SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000995
Gene Symbol: RPL34
Browse Pathways

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr4:g.108625255T>C COSN8952826 TCGA-CG-5721-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr4:g.108625208A>T COSM1731708 4-RSII [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][chronic_lymphocytic_leukaemia-small_lymphocytic_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-190a-3p aaagcTATATAaaaa CUAUAUAU m6b Created HHRBL_10894_BCBL1-2of3-SCL_6735
hsa-miR-5579-3p aAAGCTAAataaaaa UUAGCUUA m7a Disrupted HHRBL_10894_BCBL1-2of3-SCL_6735
hsa-miR-6083 aaagctATATAAaaa CUUAUAUC m6b Created HHRBL_10894_BCBL1-2of3-SCL_6735

Mutation Mutation ID Sample Name Cancer Type
chr4:g.108625189G>A COSM4543127 CSCC-11-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2113 gGCACAAAcacagag AUUUGUGC m7b Created HHRBL_10894_BCBL1-2of3-SCL_6735
hsa-miR-218-5p ggcacAAGCACAgag UUGUGCUU m7b Disrupted HHRBL_10894_BCBL1-2of3-SCL_6735
hsa-miR-5008-3p ggcacaAGCACAGag CCUGUGCU m7b Disrupted HHRBL_10894_BCBL1-2of3-SCL_6735
hsa-miR-636 ggcaCAAGCACAgag UGUGCUUG m8a Disrupted HHRBL_10894_BCBL1-2of3-SCL_6735
hsa-miR-6737-3p ggcacaAGCACAGAg UCUGUGCU m8a Disrupted HHRBL_10894_BCBL1-2of3-SCL_6735
hsa-miR-7157-3p ggcacaAGCACAGAg UCUGUGCU m8a Disrupted HHRBL_10894_BCBL1-2of3-SCL_6735

Mutation Mutation ID Sample Name Cancer Type
chr4:g.108625183G>A COSM1426292 TCGA-A6-3809-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1271-3p gttgaAGGCACaagc AGUGCCUG m6b Disrupted HHRBL_10894_BCBL1-2of3-SCL_6735
hsa-miR-4711-3p gttgAAGACACaagc CGUGUCUU m7b Created HHRBL_10894_BCBL1-2of3-SCL_6735
hsa-miR-511-5p gttgAAGACACaagc GUGUCUUU m7a Created HHRBL_10894_BCBL1-2of3-SCL_6735
hsa-miR-550a-3-5p gttgaAGGCACaagc AGUGCCUG m6b Disrupted HHRBL_10894_BCBL1-2of3-SCL_6735
hsa-miR-550a-5p gttgaAGGCACaagc AGUGCCUG m6b Disrupted HHRBL_10894_BCBL1-2of3-SCL_6735
hsa-miR-550b-2-5p gttgaAGGCACAagc AUGUGCCU m7b Disrupted HHRBL_10894_BCBL1-2of3-SCL_6735
hsa-miR-5581-5p gttGAAGGCacaagc AGCCUUCC m6b Disrupted HHRBL_10894_BCBL1-2of3-SCL_6735
hsa-miR-581 gttgaagACACAAGc UCUUGUGU m7b Created HHRBL_10894_BCBL1-2of3-SCL_6735
hsa-miR-599 gttgaaGACACAAgc GUUGUGUC m7b Created HHRBL_10894_BCBL1-2of3-SCL_6735
hsa-miR-676-5p GTTGAAGAcacaagc UCUUCAAC m8a Created HHRBL_10894_BCBL1-2of3-SCL_6735

Mutation Mutation ID Sample Name Cancer Type
chr4:g.108625143C>T COSM3598968 TCGA-EE-A29M-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-651-3p gtgcTTTCCTTatcg AAAGGAAA m7b Disrupted HHRBL_10894_BCBL1-2of3-SCL_6735
hsa-miR-6835-3p GTGCTTTTcttatcg AAAAGCAC m8a Created HHRBL_10894_BCBL1-2of3-SCL_6735

Mutation Mutation ID Sample Name Cancer Type
chr4:g.108625135C>T COSM1049897 TCGA-BS-A0UJ-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-216b-3p gatcAAGTGTGcttt ACACACUU m7b Created HHRBL_10894_BCBL1-2of3-SCL_6735
hsa-miR-8064 gatcaAGTGTGCTtt AGCACACU m8a Created HHRBL_10894_BCBL1-2of3-SCL_6735

Mutation Mutation ID Sample Name Cancer Type
chr4:g.108622567A>G COSM4121247 TCGA-BR-4361-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6719-3p aagaaacATGTCAGc UCUGACAU m7b Disrupted HHRBL_10893_BCBL1-2of3-SCL_7016
hsa-miR-6730-3p aagaaacGTGTCAGc CCUGACAC m7b Created HHRBL_10893_BCBL1-2of3-SCL_7016

Mutation Mutation ID Sample Name Cancer Type
chr4:g.108622562G>T COSM1224212 587376 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6844 aaACAAAGAAacatg UUCUUUGU m8a Disrupted HHRBL_10893_BCBL1-2of3-SCL_7016

Mutation Mutation ID Sample Name Cancer Type
chr4:g.108622561A>C COSM3945866 J87_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6844 aaaACAAAGAAacat UUCUUUGU m8a Disrupted HHRBL_10893_BCBL1-2of3-SCL_7016

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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