SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000990
Gene Symbol: RPL27A
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.8683214A>C COSM4722612 T3080 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-718 cagactGCGGAAGac CUUCCGCC m7a Created HPRO6_13670_G15899.1_8704792
hsa-miR-6886-5p cagaCTGCGGaagac CCCGCAGG m6b Created HPRO6_13670_G15899.1_8704792
hsa-miR-670-3p cagacTGAGGAAgac UUUCCUCA m7b Disrupted HPRO6_13670_G15899.1_8704792
hsa-miR-1238-3p cagactGAGGAAGac CUUCCUCG m7a Disrupted HPRO6_13670_G15899.1_8704792
hsa-miR-4264 caGACTGAGgaagac ACUCAGUC m7b (m7b->m6b) HPRO6_13670_G15899.1_8704792

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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