SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000983
Gene Symbol: RPL22
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.6197732A>AA COSM2238063 55 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-129-5p gggggGCAAAAAaaa CUUUUUGC m7b Disrupted HHRBL_51_BCBL1-2of3-SCL_3932

Mutation Mutation ID Sample Name Cancer Type
chr1:g.6197724G>AG COSM1343741 TCGA-CM-5861-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-103a-2-5p aaaaaAAGAAGCaag AGCUUCUU m7b Disrupted HHRBL_51_BCBL1-2of3-SCL_3932
hsa-miR-3977 aaaaaaaGAAGCAag GUGCUUCA m6b Disrupted HHRBL_51_BCBL1-2of3-SCL_3932

Mutation Mutation ID Sample Name Cancer Type
chr1:g.6197724AG>G COSM179404 SNU-C2B [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-103a-2-5p aaaaaaAAGAAGCaag AGCUUCUU m7b Disrupted HHRBL_51_BCBL1-2of3-SCL_3932
hsa-miR-3977 aaaaaaaGAAGCAag GUGCUUCA m6b Created HHRBL_51_BCBL1-2of3-SCL_3932

Mutation Mutation ID Sample Name Cancer Type
chr1:g.6197724AAG>G COSM2238062 Gp5D [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-103a-2-5p caaaaaaAAGAAGCaag AGCUUCUU m7b Disrupted HHRBL_51_BCBL1-2of3-SCL_3932

Mutation Mutation ID Sample Name Cancer Type
chr1:g.6197723A>AA COSM4167695 TLE10 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][acute_lymphoblastic_T_cell_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-103a-2-5p aaaaAAGAAGCaagt AGCUUCUU m7b Disrupted HHRBL_51_BCBL1-2of3-SCL_3932
hsa-miR-3160-5p aaaaaAGAAAGCaagt GGCUUUCU m7b Created HHRBL_51_BCBL1-2of3-SCL_3932
hsa-miR-3977 aaaaaaGAAGCAagt GUGCUUCA m6b Disrupted HHRBL_51_BCBL1-2of3-SCL_3932

Mutation Mutation ID Sample Name Cancer Type
chr1:g.6197694C>A COSM4940918 TCGA-DD-A4NE-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-23a-5p ttgattGAACCCacc GGGGUUCC m6b Created HHRBL_51_BCBL1-2of3-SCL_3932
hsa-miR-4705 tTGATTGAacccacc UCAAUCAC m7a Created HHRBL_51_BCBL1-2of3-SCL_3932
hsa-miR-6741-5p ttgattGCACCCACc GUGGGUGC m8a Disrupted HHRBL_51_BCBL1-2of3-SCL_3932
hsa-miR-6748-5p ttgattgCACCCACc UGUGGGUG m7b Disrupted HHRBL_51_BCBL1-2of3-SCL_3932
hsa-miR-6793-5p ttgattgAACCCACc UGUGGGUU m7b Created HHRBL_51_BCBL1-2of3-SCL_3932

Mutation Mutation ID Sample Name Cancer Type
chr1:g.6197686C>A COSM3386269 8016470 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-139-5p acccaccCTGTAGAa UCUACAGU m7a Disrupted HHRBL_51_BCBL1-2of3-SCL_3932
hsa-miR-6756-5p aCCCACCCTgtagaa AGGGUGGG m8a (m8a->m7a) HHRBL_51_BCBL1-2of3-SCL_3932
hsa-miR-7151-3p acccacCCTGTAGaa CUACAGGC m7a Disrupted HHRBL_51_BCBL1-2of3-SCL_3932
hsa-miR-942-3p acccaCCATGTagaa CACAUGGC m6b Created HHRBL_51_BCBL1-2of3-SCL_3932

Mutation Mutation ID Sample Name Cancer Type
chr1:g.6197668T>G COSM4009213 TCGA-EQ-8122-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-324-5p ggaatcaGGGATGCt CGCAUCCC m7b Created HHRBL_51_BCBL1-2of3-SCL_3932
hsa-miR-345-3p ggaaTCAGGGatgct GCCCUGAA m6b Created HHRBL_51_BCBL1-2of3-SCL_3932
hsa-miR-4732-3p ggaaTCAGGGatgct GCCCUGAC m6b Created HHRBL_51_BCBL1-2of3-SCL_3932
hsa-miR-670-5p ggaaTCAGGGAtgct GUCCCUGA m7b Created HHRBL_51_BCBL1-2of3-SCL_3932

Mutation Mutation ID Sample Name Cancer Type
chr1:g.6197666G>A COSM1686928 YUDUTY [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1179 aatcatGAATGCTgc AAGCAUUC m7b Created HHRBL_51_BCBL1-2of3-SCL_3932
hsa-miR-4310 aatcatgAATGCTGc GCAGCAUU m7b Created HHRBL_51_BCBL1-2of3-SCL_3932
hsa-miR-433-3p aATCATGAatgctgc AUCAUGAU m7b Created HHRBL_51_BCBL1-2of3-SCL_3932
hsa-miR-7157-5p aatcatgAATGCTGc UCAGCAUU m7b Created HHRBL_51_BCBL1-2of3-SCL_3932

Mutation Mutation ID Sample Name Cancer Type
chr1:g.6197653T>A COSM911290 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-520d-5p gccaatTTTGTAagt CUACAAAG m6b Disrupted HHRBL_51_BCBL1-2of3-SCL_3932
hsa-miR-524-5p gccaatTTTGTAagt CUACAAAG m6b Disrupted HHRBL_51_BCBL1-2of3-SCL_3932

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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