SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000982
Gene Symbol: RPL21

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.120355038A>T COSM3747139 CHC322T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4773 aCTGTTCTaaaagga CAGAACAG m7b Created HHKTA_52116_AB209100|214|253|1.29803823155271|0.228671360561586
hsa-miR-5687 actGTTCTAAaagga UUAGAACG m7a Created HHKTA_52116_AB209100|214|253|1.29803823155271|0.228671360561586
hsa-miR-4773 aCTGTTCTaaaagga CAGAACAG m7b Created HHKTA_52260_NM_000982|155|194|1.29803823155271|0.756257788013253
hsa-miR-5687 actGTTCTAAaagga UUAGAACG m7a Created HHKTA_52260_NM_000982|155|194|1.29803823155271|0.756257788013253

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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