SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000950
Gene Symbol: PRRG1

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chrX:g.37453228C>A COSM3424781 TCGA-F5-6814-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chrX:g.37453222G>A COSM1467849 TCGA-A6-6781-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3978 cCTTTCCAttaatct GUGGAAAG m7b Created HPRO6_79028_G94685.1_37312470
hsa-miR-3688-3p ccTTTCCATtaatct UAUGGAAA m7b (m6b->m7b) HPRO6_79028_G94685.1_37312470
hsa-miR-191-5p cctTTCCGTTaatct CAACGGAA m7b Disrupted HPRO6_79028_G94685.1_37312470

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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