SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000945
Gene Symbol: PPP3R1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.68186571G>A COSM1483198 TCGA-BH-A1FL-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7156-5p atggtgGAGAACAAt UUGUUCUC m8a Created HPKMA_8715_G10088.1_68413699
hsa-miR-1224-3p atGGTGGGGaacaat CCCCACCU m7a (m7a->m6a) HPKMA_8715_G10088.1_68413699
hsa-miR-2117 atggtgGAGAACAat UGUUCUCU m7a Created HPKMA_8715_G10088.1_68413699
hsa-miR-2355-5p atggTGGGGAacaat AUCCCCAG m6b Disrupted HPKMA_8715_G10088.1_68413699
hsa-miR-4273 atggtgGAGAACAat GUGUUCUC m7b Created HPKMA_8715_G10088.1_68413699
hsa-miR-4286 atgGTGGGGaacaat ACCCCACU m6b Disrupted HPKMA_8715_G10088.1_68413699
hsa-miR-629-3p atggtGGAGAACaat GUUCUCCC m7a Created HPKMA_8715_G10088.1_68413699
hsa-miR-642b-5p atggtgGGGAACaat GGUUCCCU m6b Disrupted HPKMA_8715_G10088.1_68413699
hsa-miR-6739-3p atggtggAGAACAAt AUUGUUCU m7b Created HPKMA_8715_G10088.1_68413699

Mutation Mutation ID Sample Name Cancer Type
chr2:g.68186568A>G COSM3055593 HCT15 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7106-3p gtgGGGAGCaatctg AGCUCCCU m6b Created HPKMA_8715_G10088.1_68413699
hsa-miR-642b-5p gtgGGGAACaatctg GGUUCCCU m6b Disrupted HPKMA_8715_G10088.1_68413699
hsa-miR-4445-5p gtggggAACAATCTg AGAUUGUU m8a Disrupted HPKMA_8715_G10088.1_68413699

Mutation Mutation ID Sample Name Cancer Type
chr2:g.68186562T>C COSM3055592 RKO [large_intestine][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-30a-3p aacaatCTGAAAGat CUUUCAGU m7a Disrupted HPKMA_8715_G10088.1_68413699
hsa-miR-30d-3p aacaatCTGAAAGat CUUUCAGU m7a Disrupted HPKMA_8715_G10088.1_68413699
hsa-miR-30e-3p aacaatCTGAAAGat CUUUCAGU m7a Disrupted HPKMA_8715_G10088.1_68413699
hsa-miR-3942-3p aacaATCTGAAAgat UUUCAGAU m8a Disrupted HPKMA_8715_G10088.1_68413699
hsa-miR-4445-5p AACAATCTgaaagat AGAUUGUU m8a Disrupted HPKMA_8715_G10088.1_68413699
hsa-miR-5100 aacaATCTGAAagat UUCAGAUC m7a Disrupted HPKMA_8715_G10088.1_68413699
hsa-miR-10b-3p aacAATCTGaaagat ACAGAUUC m6b Disrupted HPKMA_8715_G10088.1_68413699

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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