SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000942
Gene Symbol: PPIB

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr15:g.64162921C>G COSM555683 TCGA-44-2661-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3185 ggtccgtCTTCTTCc AGAAGAAG m7b Disrupted HHHNA_7467_PPIB|NM_000942|exon_CDS|-5.50673298507563|0.840864098758476

Mutation Mutation ID Sample Name Cancer Type
chr15:g.64162882G>A COSM3794317 TCGA-BT-A3PJ-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-335-3p ccgATGAAAAgaaga UUUUUCAU m7b Created HHHNA_7467_PPIB|NM_000942|exon_CDS|-5.50673298507563|0.840864098758476
hsa-miR-4659a-3p ccgatgAGAAGAAga UUUCUUCU m7b Disrupted HHHNA_7467_PPIB|NM_000942|exon_CDS|-5.50673298507563|0.840864098758476
hsa-miR-4659b-3p ccgatgAGAAGAAga UUUCUUCU m7b Disrupted HHHNA_7467_PPIB|NM_000942|exon_CDS|-5.50673298507563|0.840864098758476
hsa-miR-4778-3p ccgatgaGAAGAAGa UCUUCUUC m7b Disrupted HHHNA_7467_PPIB|NM_000942|exon_CDS|-5.50673298507563|0.840864098758476
hsa-miR-627-3p ccgatGAAAAGAaga UCUUUUCU m7a Created HHHNA_7467_PPIB|NM_000942|exon_CDS|-5.50673298507563|0.840864098758476
hsa-miR-6870-3p ccGATGAGaagaaga GCUCAUCC m6b Disrupted HHHNA_7467_PPIB|NM_000942|exon_CDS|-5.50673298507563|0.840864098758476
hsa-miR-942-5p ccgatGAGAAGAaga UCUUCUCU m7a Disrupted HHHNA_7467_PPIB|NM_000942|exon_CDS|-5.50673298507563|0.840864098758476

Mutation Mutation ID Sample Name Cancer Type
chr15:g.64162865A>T COSM700727 TCGA-51-4079-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3164 gggcccaAAGTCACc UGUGACUU m7b Disrupted HHHNA_7467_PPIB|NM_000942|exon_CDS|-5.50673298507563|0.840864098758476
hsa-miR-6820-3p gggcccaAAGTCACc UGUGACUU m7b Disrupted HHHNA_7467_PPIB|NM_000942|exon_CDS|-5.50673298507563|0.840864098758476
hsa-miR-6773-5p GGGCCCAAagtcacc UUGGGCCC m8a Disrupted HHHNA_7467_PPIB|NM_000942|exon_CDS|-5.50673298507563|0.840864098758476

Mutation Mutation ID Sample Name Cancer Type
chr15:g.64162858C>T COSM4150998 C0002T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-433-5p aagTCACCGTcaagg UACGGUGA m7b Disrupted HHHNA_7467_PPIB|NM_000942|exon_CDS|-5.50673298507563|0.840864098758476
hsa-miR-4645-3p aagtcACTGTCaagg AGACAGUA m6b Created HHHNA_7467_PPIB|NM_000942|exon_CDS|-5.50673298507563|0.840864098758476
hsa-miR-5190 aaGTCACTGtcaagg CCAGUGAC m7b (m6b->m7b) HHHNA_7467_PPIB|NM_000942|exon_CDS|-5.50673298507563|0.840864098758476

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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