SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000942
Gene Symbol: PPIB

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr15:g.64162921C>G COSM555683 TCGA-44-2661-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3185 ggtccgtCTTCTTCc AGAAGAAG m7b Disrupted HHFKP_48394_cluster-8002_8_179

Mutation Mutation ID Sample Name Cancer Type
chr15:g.64162142C>A COSM4467424 CSCC-31-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-370-5p tttTGACCTacgaat CAGGUCAC m6b Disrupted HHFKP_48393_cluster-8002_7_79

Mutation Mutation ID Sample Name Cancer Type
chr15:g.64162127G>T COSM4835332 TCGA-Q1-A73O-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-216a-5p tgGAGATTAagatgt UAAUCUCA m7a (m6a->m7a) HHFKP_48393_cluster-8002_7_79
hsa-miR-216b-5p tgGAGATTaagatgt AAAUCUCU m6b Created HHFKP_48393_cluster-8002_7_79
hsa-miR-452-3p tggAGATGAagatgt CUCAUCUG m6b Disrupted HHFKP_48393_cluster-8002_7_79

Mutation Mutation ID Sample Name Cancer Type
chr15:g.64162124G>T COSM1301318 TCGA-DK-A3IK-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6074 agaTGAATATgtagg GAUAUUCA m7b Created HHFKP_48393_cluster-8002_7_79
hsa-miR-5580-3p agatgaATATGTagg CACAUAUG m6b Created HHFKP_48393_cluster-8002_7_79

Mutation Mutation ID Sample Name Cancer Type
chr15:g.64162111T>G COSM3816539 TCGA-A8-A0A6-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4707-5p gGCCGGGGgatcttt GCCCCGGC m7b Created HHFKP_48392_cluster-8002_6_269
hsa-miR-6840-5p ggCCGGGGGatcttt ACCCCCGG m7b (m6b->m7b) HHFKP_48392_cluster-8002_6_269
hsa-miR-941 gGCCGGGTGatcttt CACCCGGC m8a (m8a->m7a) HHFKP_48392_cluster-8002_6_269

Mutation Mutation ID Sample Name Cancer Type
chr15:g.64162093G>A COSM1749262 B77 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3124-3p ctcttcGGAAAGact ACUUUCCU m6b Disrupted HHFKP_48392_cluster-8002_6_269
hsa-miR-6830-3p ctcttcgGAAAGACt UGUCUUUC m7b Disrupted HHFKP_48392_cluster-8002_6_269

Mutation Mutation ID Sample Name Cancer Type
chr15:g.64162083GTT>T COSM1374025 TCGA-AU-6004-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-212-3p aaaGACTGTTccaaaaa UAACAGUC m7b Disrupted HHFKP_48392_cluster-8002_6_269
hsa-miR-6079 aaagaCTTCCAAaaa UUGGAAGC m7a Created HHFKP_48392_cluster-8002_6_269
hsa-miR-7850-5p aaagactTCCAAAaa GUUUGGAC m6b Created HHFKP_48392_cluster-8002_6_269
hsa-miR-132-3p aaaGACTGTTccaaaaa UAACAGUC m7b Disrupted HHFKP_48392_cluster-8002_6_269

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser