SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000927
Gene Symbol: ABCB1
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr7:g.87531403T>G COSM3883056 TCGA-F1-A448-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-194-5p ctaacaCTGTTACtc UGUAACAG m7b Disrupted HHFKP_131422_cluster-21497_3_19
hsa-miR-451a ctaacACGGTTactc AAACCGUU m6b Created HHFKP_131422_cluster-21497_3_19
hsa-miR-802 ctaacacTGTTACTc CAGUAACA m7b Disrupted HHFKP_131422_cluster-21497_3_19

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87531402G>A COSM1550442 TCGA-55-7907-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-194-5p taacaCTGTTACtct UGUAACAG m7b Disrupted HHFKP_131422_cluster-21497_3_19
hsa-miR-633 taacACTATTActct CUAAUAGU m7b Created HHFKP_131422_cluster-21497_3_19
hsa-miR-802 taacacTGTTACTct CAGUAACA m7b Disrupted HHFKP_131422_cluster-21497_3_19

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87531389A>T COSM4434097 436 [oesophagus][lower_third][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-105-5p cttaGCATTTGtacc UCAAAUGC m7b Created HHFKP_131422_cluster-21497_3_19
hsa-miR-302f cttAGCAATTgtacc UAAUUGCU m7b Disrupted HHFKP_131422_cluster-21497_3_19
hsa-miR-7849-3p cttagCAATTGTacc GACAAUUG m7b Disrupted HHFKP_131422_cluster-21497_3_19
hsa-miR-7853-5p cttaGCATTTGtacc UCAAAUGC m7b Created HHFKP_131422_cluster-21497_3_19

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87531388T>A COSM3698572 TCGA-G4-6302-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-302f ttAGCAATTgtaccc UAAUUGCU m7b (m7b->m6b) HHFKP_131422_cluster-21497_3_19
hsa-miR-7849-3p ttagCAATTGTaccc GACAAUUG m7b Disrupted HHFKP_131422_cluster-21497_3_19

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87531364G>T COSM1092606 TCGA-AX-A05Z-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1976 ataGCAGGAGttgtt CCUCCUGC m7b Disrupted HHFKP_131422_cluster-21497_3_19
hsa-miR-370-3p atAGCAGGagttgtt GCCUGCUG m6b Disrupted HHFKP_131422_cluster-21497_3_19
hsa-miR-606 atagcAGTAGTTgtt AAACUACU m7b Created HHFKP_131422_cluster-21497_3_19
hsa-miR-6893-3p atAGCAGGagttgtt CCCUGCUG m6b Disrupted HHFKP_131422_cluster-21497_3_19

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87506037A>T COSM308752 S00945 [lung][NS][carcinoma][small_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-130a-3p gaaataTTGCACTaa CAGUGCAA m7b Created HHFKP_131420_cluster-21497_1_34
hsa-miR-130b-3p gaaataTTGCACTaa CAGUGCAA m7b Created HHFKP_131420_cluster-21497_1_34
hsa-miR-16-2-3p gaAATATTGcactaa CCAAUAUU m7b (m6b->m7b) HHFKP_131420_cluster-21497_1_34
hsa-miR-195-3p gaAATATTGcactaa CCAAUAUU m7b (m6b->m7b) HHFKP_131420_cluster-21497_1_34
hsa-miR-301a-3p gaaataTTGCACTaa CAGUGCAA m7b Created HHFKP_131420_cluster-21497_1_34
hsa-miR-301b-3p gaaataTTGCACTaa CAGUGCAA m7b Created HHFKP_131420_cluster-21497_1_34
hsa-miR-3666 gaaataTTGCACTaa CAGUGCAA m7b Created HHFKP_131420_cluster-21497_1_34
hsa-miR-4295 gaaataTTGCACTaa CAGUGCAA m7b Created HHFKP_131420_cluster-21497_1_34
hsa-miR-4473 gaaatatAGCACTAa CUAGUGCU m7b Disrupted HHFKP_131420_cluster-21497_1_34
hsa-miR-454-3p gaaataTTGCACTAa UAGUGCAA m8a Created HHFKP_131420_cluster-21497_1_34
hsa-miR-4671-3p gaaatatTGCACTAa UUAGUGCA m7b Created HHFKP_131420_cluster-21497_1_34
hsa-miR-512-3p gaaatatAGCACTaa AAGUGCUG m6b Disrupted HHFKP_131420_cluster-21497_1_34
hsa-miR-520f-3p gaaatatAGCACTaa AAGUGCUU m6b Disrupted HHFKP_131420_cluster-21497_1_34

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87506015G>A COSM1698850 YUAKER [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3121-5p gaCAAAGGAactcag UCCUUUGC m7a (m7a->m6a) HHFKP_131420_cluster-21497_1_34
hsa-miR-6844 gACAAAGAAactcag UUCUUUGU m8a (m7a->m8a) HHFKP_131420_cluster-21497_1_34

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87506010C>T COSM747743 TCGA-66-2785-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3160-3p aggaacTCAGCTCTc AGAGCUGA m8a Disrupted HHFKP_131420_cluster-21497_1_34
hsa-miR-4682 aggAACTCAGctctc UCUGAGUU m7b Disrupted HHFKP_131420_cluster-21497_1_34
hsa-miR-610 aggaacTTAGCTCtc UGAGCUAA m7b Created HHFKP_131420_cluster-21497_1_34
hsa-miR-8077 aggaACTCAGCtctc GGCUGAGU m7b Disrupted HHFKP_131420_cluster-21497_1_34

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87506000G>T COSM354606 LUAD_E00623 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4701-5p ctctctgGTGGCCAg UUGGCCAC m7b Disrupted HHFKP_131420_cluster-21497_1_34
hsa-miR-548s ctctctgTTGGCCAg AUGGCCAA m7b Created HHFKP_131420_cluster-21497_1_34
hsa-miR-588 ctctctgGTGGCCAg UUGGCCAC m7b Disrupted HHFKP_131420_cluster-21497_1_34

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87505986C>T COSM4489888 CSCC-56-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-33a-5p gaaaCAATGCAttgc GUGCAUUG m7b Created HHFKP_131420_cluster-21497_1_34
hsa-miR-33b-5p gaaaCAATGCAttgc GUGCAUUG m7b Created HHFKP_131420_cluster-21497_1_34
hsa-miR-4289 gaaACAATGCattgc GCAUUGUG m7a Created HHFKP_131420_cluster-21497_1_34
hsa-miR-5700 gaaacaATGCATTgc UAAUGCAU m7b Created HHFKP_131420_cluster-21497_1_34
hsa-miR-586 gaaacAATGCATtgc UAUGCAUU m7b Created HHFKP_131420_cluster-21497_1_34

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87505979C>T COSM3641903 TCGA-EE-A2A0-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-425-5p cgcatTGTCATagct AAUGACAC m6b Created HHFKP_131420_cluster-21497_1_34

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87505976T>C COSM602545 TCGA-05-4390-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3688-5p aTTGCCACagctcgt AGUGGCAA m7b Created HHFKP_131420_cluster-21497_1_34
hsa-miR-891a-3p atTGCCACagctcgt AGUGGCAC m6b Created HHFKP_131420_cluster-21497_1_34

Mutation Mutation ID Sample Name Cancer Type
chr7:g.87505969T>C COSM4570969 CSCC-29-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3178 tagctCGCGCCCttg GGGGCGCG m7b Created HHFKP_131420_cluster-21497_1_34
hsa-miR-4634 tagcTCGCGCCcttg CGGCGCGA m7b Created HHFKP_131420_cluster-21497_1_34

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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