SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_000921
Gene Symbol: PDE3A
Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr12:g.20552052T>G COSN7321576 8061185 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-570-3p tgggaaTGTTTTCac CGAAAACA m7b Created HPRT3_5732_G7537.1_20704991
hsa-miR-543 tggGAATGTTTtcac AAACAUUC m8a Created HPRT3_5732_G7537.1_20704991

Mutation Mutation ID Sample Name Cancer Type
chr12:g.20552050A>G COSN8585809 3765_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548aq-3p catgggAGTTTTTtc CAAAAACU m7b Created HPRT3_5732_G7537.1_20704991
hsa-miR-548am-3p catgggAGTTTTTtc CAAAAACU m7b Created HPRT3_5732_G7537.1_20704991
hsa-miR-548aj-3p catgggAGTTTTTtc UAAAAACU m7b Created HPRT3_5732_G7537.1_20704991
hsa-miR-548ae-3p catgggAGTTTTTtc CAAAAACU m7b Created HPRT3_5732_G7537.1_20704991
hsa-miR-548ah-3p catgggAGTTTTTtc CAAAAACU m7b Created HPRT3_5732_G7537.1_20704991
hsa-miR-548j-3p catgggAGTTTTTtc CAAAAACU m7b Created HPRT3_5732_G7537.1_20704991
hsa-miR-548x-3p catgggAGTTTTTtc UAAAAACU m7b Created HPRT3_5732_G7537.1_20704991
hsa-miR-2116-3p cATGGGAGttttttc CCUCCCAU m7b Created HPRT3_5732_G7537.1_20704991

Mutation Mutation ID Sample Name Cancer Type
chr12:g.20551552G>C COSN8705121 AOCS-088-3-8 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-562 ctaaCTACTTacgcg AAAGUAGC m6b Created HPRT3_5731_G7536.1_20704466
hsa-miR-1244 ctAACTACTTacgcg AAGUAGUU m8a Created HPRT3_5731_G7536.1_20704466
hsa-miR-3923 ctaACTAGTTacgcg AACUAGUA m7a Disrupted HPRT3_5731_G7536.1_20704466
hsa-miR-708-3p ctaaCTAGTTacgcg CAACUAGA m6b Disrupted HPRT3_5731_G7536.1_20704466

Mutation Mutation ID Sample Name Cancer Type
chr12:g.20530885A>C COSN8705109 AOCS-083-1-7 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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