SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_000921
Gene Symbol: PDE3A
Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr12:g.20552052T>G COSN7321576 8061185 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-570-3p tgggaaTGTTTTCac CGAAAACA m7b Created HPKTA_13014_G14045.1_20704996
hsa-miR-543 tggGAATGTTTtcac AAACAUUC m8a Created HPKTA_13014_G14045.1_20704996

Mutation Mutation ID Sample Name Cancer Type
chr12:g.20552050A>G COSN8585809 3765_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548j-3p catgggAGTTTTTtc CAAAAACU m7b Created HPKTA_13014_G14045.1_20704996
hsa-miR-548x-3p catgggAGTTTTTtc UAAAAACU m7b Created HPKTA_13014_G14045.1_20704996
hsa-miR-2116-3p cATGGGAGttttttc CCUCCCAU m7b Created HPKTA_13014_G14045.1_20704996
hsa-miR-548ae-3p catgggAGTTTTTtc CAAAAACU m7b Created HPKTA_13014_G14045.1_20704996
hsa-miR-548ah-3p catgggAGTTTTTtc CAAAAACU m7b Created HPKTA_13014_G14045.1_20704996
hsa-miR-548aj-3p catgggAGTTTTTtc UAAAAACU m7b Created HPKTA_13014_G14045.1_20704996
hsa-miR-548am-3p catgggAGTTTTTtc CAAAAACU m7b Created HPKTA_13014_G14045.1_20704996
hsa-miR-548aq-3p catgggAGTTTTTtc CAAAAACU m7b Created HPKTA_13014_G14045.1_20704996

Mutation Mutation ID Sample Name Cancer Type
chr12:g.20551552G>C COSN8705121 AOCS-088-3-8 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3923 ctaACTAGTTacgcg AACUAGUA m7a Disrupted HPKTA_13013_G14044.2_20704501
hsa-miR-562 ctaaCTACTTacgcg AAAGUAGC m6b Created HPKTA_13013_G14044.2_20704501
hsa-miR-708-3p ctaaCTAGTTacgcg CAACUAGA m6b Disrupted HPKTA_13013_G14044.2_20704501
hsa-miR-1244 ctAACTACTTacgcg AAGUAGUU m8a Created HPKTA_13013_G14044.2_20704501

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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