SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000908
Gene Symbol: NPR3

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.32787046C>T COSN6585665 ICGC_MB53 [central_nervous_system][brain][primitive_neuroectodermal_tumour-medulloblastoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-130a-3p cctattTTGCACTaa CAGUGCAA m7b Created HHFKP_117336_cluster-17990_26_36
hsa-miR-130b-3p cctattTTGCACTaa CAGUGCAA m7b Created HHFKP_117336_cluster-17990_26_36
hsa-miR-1468-3p cctATTTTGCactaa AGCAAAAU m7b Created HHFKP_117336_cluster-17990_26_36
hsa-miR-19a-3p cctatTTTGCACtaa UGUGCAAA m7b Created HHFKP_117336_cluster-17990_26_36
hsa-miR-19b-3p cctatTTTGCACtaa UGUGCAAA m7b Created HHFKP_117336_cluster-17990_26_36
hsa-miR-301a-3p cctattTTGCACTaa CAGUGCAA m7b Created HHFKP_117336_cluster-17990_26_36
hsa-miR-301b-3p cctattTTGCACTaa CAGUGCAA m7b Created HHFKP_117336_cluster-17990_26_36
hsa-miR-3666 cctattTTGCACTaa CAGUGCAA m7b Created HHFKP_117336_cluster-17990_26_36
hsa-miR-4295 cctattTTGCACTaa CAGUGCAA m7b Created HHFKP_117336_cluster-17990_26_36
hsa-miR-454-3p cctattTTGCACTAa UAGUGCAA m8a Created HHFKP_117336_cluster-17990_26_36
hsa-miR-4671-3p cctatttTGCACTAa UUAGUGCA m7b Created HHFKP_117336_cluster-17990_26_36
hsa-miR-548aw cctaTTTTGCACtaa GUGCAAAA m8a Created HHFKP_117336_cluster-17990_26_36

Mutation Mutation ID Sample Name Cancer Type
chr5:g.32786570C>T COSN5603948 RK143_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1236-5p atcgtGTCACTCtgt UGAGUGAC m7b Disrupted HHFKP_117331_cluster-17990_21_17
hsa-miR-5586-3p atcgtgTCACTCTGt CAGAGUGA m8a Disrupted HHFKP_117331_cluster-17990_21_17
hsa-miR-759 atcgtgtCACTCTGt GCAGAGUG m7b Disrupted HHFKP_117331_cluster-17990_21_17
hsa-miR-802 atcgTGTTACTctgt CAGUAACA m7b Created HHFKP_117331_cluster-17990_21_17

Mutation Mutation ID Sample Name Cancer Type
chr5:g.32786308G>C COSM449550 TCGA-C8-A12V-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4664-3p gaattACCGGAAGat CUUCCGGU m8a Created HHFKP_117329_cluster-17990_19_16

Mutation Mutation ID Sample Name Cancer Type
chr5:g.32786308G>A COSM3776631 TCGA-E7-A3Y1-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-486-5p gaatTACAGGAagat UCCUGUAC m7a Created HHFKP_117329_cluster-17990_19_16
hsa-miR-7152-5p gaattACAGGAAgat UUUCCUGU m7b Created HHFKP_117329_cluster-17990_19_16
hsa-miR-486-5p gaatTACAGGAagat UCCUGUAC m7a Created HHFKP_117329_cluster-17990_19_16
hsa-miR-7152-5p gaattACAGGAAgat UUUCCUGU m7b Created HHFKP_117329_cluster-17990_19_16
Mutation Mutation ID Sample Name Cancer Type
chr5:g.32786307C>T COSM1437062 TCGA-CK-5915-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr5:g.32711948T>G COSM3854734 TCGA-BR-8081-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-21-3p gcTGGTGTTactgcc CAACACCA m7b (m7b->m6b) HHFKP_117314_cluster-17990_4_13
hsa-miR-3591-3p gcTGGTGTTactgcc AAACACCA m7b (m7b->m6b) HHFKP_117314_cluster-17990_4_13
hsa-miR-624-5p gctggTGGTACTgcc UAGUACCA m7b Created HHFKP_117314_cluster-17990_4_13
hsa-miR-802 gctggTGTTACTGcc CAGUAACA m8a Disrupted HHFKP_117314_cluster-17990_4_13

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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