SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000883
Gene Symbol: IMPDH1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr7:g.128398530C>T COSM744648 TCGA-46-3769-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3926 ctacccTTTGGCCtc UGGCCAAA m7b Created HHFKP_132596_cluster-21656_9_256

Mutation Mutation ID Sample Name Cancer Type
chr7:g.128398467G>A COSM116212 TCGA-13-1510-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4793-5p tgAGGATGacaaata ACAUCCUG m6b Disrupted HHFKP_132595_cluster-21656_8_24
hsa-miR-5196-3p tGAGGATGAcaaata UCAUCCUC m8a (m8a->m7a) HHFKP_132595_cluster-21656_8_24

Mutation Mutation ID Sample Name Cancer Type
chr7:g.128398466A>G COSM4926993 TCGA-G3-A25S-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4659a-5p gaggATGGCAaatac CUGCCAUG m6b Created HHFKP_132595_cluster-21656_8_24
hsa-miR-4659b-5p gaggATGGCAAatac UUGCCAUG m7a Created HHFKP_132595_cluster-21656_8_24
hsa-miR-4776-3p gaggATGGCAAatac CUUGCCAU m7b Created HHFKP_132595_cluster-21656_8_24
hsa-miR-5196-3p GAGGATGAcaaatac UCAUCCUC m8a Disrupted HHFKP_132595_cluster-21656_8_24
hsa-miR-5590-5p gaggATGGCAAatac UUGCCAUA m7a Created HHFKP_132595_cluster-21656_8_24

Mutation Mutation ID Sample Name Cancer Type
chr7:g.128398459C>T COSM4456993 CSCC-32-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3145-3p acAAATATCgtctgg AGAUAUUU m7b (m6b->m7b) HHFKP_132595_cluster-21656_8_24

Mutation Mutation ID Sample Name Cancer Type
chr7:g.128398436C>T COSM2150361 TCGA-06-0173 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1224-3p acccAGGTGGGcgtc CCCCACCU m7b Created HHFKP_132595_cluster-21656_8_24
hsa-miR-4485-5p accCAGGCGGgcgtc ACCGCCUG m7b Disrupted HHFKP_132595_cluster-21656_8_24
hsa-miR-4707-3p acccaGGCGGGCgtc AGCCCGCC m7b Disrupted HHFKP_132595_cluster-21656_8_24
hsa-miR-6742-3p ACCCAGGTgggcgtc ACCUGGGU m8a Created HHFKP_132595_cluster-21656_8_24
hsa-miR-6765-3p acCCAGGTGggcgtc UCACCUGG m7b (m6b->m7b) HHFKP_132595_cluster-21656_8_24
hsa-miR-7851-3p aCCCAGGTgggcgtc UACCUGGG m7b Created HHFKP_132595_cluster-21656_8_24

Mutation Mutation ID Sample Name Cancer Type
chr7:g.128398433G>A COSM3877933 TCGA-HF-7132-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4707-3p caGGCGGGCgtcgac AGCCCGCC m7b (m7b->m6b) HHFKP_132595_cluster-21656_8_24
hsa-miR-6786-3p caggcGGGCGTCgac UGACGCCC m7b Disrupted HHFKP_132595_cluster-21656_8_24

Mutation Mutation ID Sample Name Cancer Type
chr7:g.128398431G>A COSM1673521 SK-MEL-5 [skin][axilla][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6786-3p ggcGGGCGTCgacgt UGACGCCC m7b Disrupted HHFKP_132595_cluster-21656_8_24

Mutation Mutation ID Sample Name Cancer Type
chr7:g.128398426C>T COSM3877932 TCGA-BR-4257-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3913-3p gcgtcGATGTCatag AGACAUCA m6b Created HHFKP_132595_cluster-21656_8_24
hsa-miR-425-5p gcgtcgaTGTCATag AAUGACAC m6b Created HHFKP_132595_cluster-21656_8_24
hsa-miR-4757-3p gcgtcgACGTCATag CAUGACGU m7b Disrupted HHFKP_132595_cluster-21656_8_24
hsa-miR-489-3p gcgtcGATGTCAtag GUGACAUC m7b Created HHFKP_132595_cluster-21656_8_24

Mutation Mutation ID Sample Name Cancer Type
chr7:g.128394497C>T COSM4781674 8015299 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4716-5p tccAACATGGctgcc UCCAUGUU m7b Created HHFKP_132593_cluster-21656_6_164
hsa-miR-4781-3p tCCAACATggctgcc AAUGUUGG m7b Created HHFKP_132593_cluster-21656_6_164

Mutation Mutation ID Sample Name Cancer Type
chr7:g.128394313G>A COSM4877585 TCGA-J9-A52C-01 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1587 ccatgtCAGCCCAga UUGGGCUG m7b Created HHFKP_132592_cluster-21656_5_14
hsa-miR-3620-5p ccatgtCAGCCCAga GUGGGCUG m7b Created HHFKP_132592_cluster-21656_5_14
hsa-miR-378g ccatgtcAGCCCAGa ACUGGGCU m7b Created HHFKP_132592_cluster-21656_5_14
hsa-miR-4492 ccatgtCAGCCCaga GGGGCUGG m6b Created HHFKP_132592_cluster-21656_5_14
hsa-miR-4656 ccatgTCAGCCCAga UGGGCUGA m8a Created HHFKP_132592_cluster-21656_5_14
hsa-miR-4674 ccatgtcAGCCCAGa CUGGGCUC m7a Created HHFKP_132592_cluster-21656_5_14
hsa-miR-4675 ccatgtCAGCCCaga GGGGCUGU m6b Created HHFKP_132592_cluster-21656_5_14
hsa-miR-4741 ccatgtCAGCCCaga CGGGCUGU m6b Created HHFKP_132592_cluster-21656_5_14
hsa-miR-5001-5p ccatgtCAGCCCaga AGGGCUGG m6b Created HHFKP_132592_cluster-21656_5_14
hsa-miR-6719-3p ccATGTCAGcccaga UCUGACAU m7b (m6b->m7b) HHFKP_132592_cluster-21656_5_14
hsa-miR-6724-5p ccatgtcGGCCCAGa CUGGGCCC m7a Disrupted HHFKP_132592_cluster-21656_5_14
hsa-miR-6781-5p ccatgtCGGCCCaga CGGGCCGG m6b Disrupted HHFKP_132592_cluster-21656_5_14
hsa-miR-6877-5p ccatgTCGGCCCaga AGGGCCGA m7b Disrupted HHFKP_132592_cluster-21656_5_14
hsa-miR-762 ccatgtCAGCCCaga GGGGCUGG m6b Created HHFKP_132592_cluster-21656_5_14

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser