SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000878
Gene Symbol: IL2RB
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr22:g.37128654C>T COSM3912741 TCGA-EB-A5SG-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3148 acttcTTTTTCCAcc UGGAAAAA m8a Created HPCB1_26141_G33177.1_37524690
hsa-miR-3185 aCTTCTTCTtccacc AGAAGAAG m8a (m8a->m7a) HPCB1_26141_G33177.1_37524690
hsa-miR-3190-3p acttcttCTTCCACc UGUGGAAG m7b Disrupted HPCB1_26141_G33177.1_37524690
hsa-miR-6077 acttctTCTTCCacc GGGAAGAG m6b Disrupted HPCB1_26141_G33177.1_37524690
hsa-miR-6124 acttctTTTTCCacc GGGAAAAG m6b Created HPCB1_26141_G33177.1_37524690

Mutation Mutation ID Sample Name Cancer Type
chr22:g.37128144C>T COSM3554110 TCGA-D3-A2JF-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5697 atgcCTACTTGtccc UCAAGUAG m7b Disrupted HPCB1_26138_G33174.1_37524183
hsa-miR-6806-5p aTGCCTACttgtccc UGUAGGCA m7b Disrupted HPCB1_26138_G33174.1_37524183

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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