SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000836
Gene Symbol: GRIN2D
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.48414425G>C COSM3371401 TCGA-DJ-A3UN-01 [thyroid][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6794-5p tggTCCCCCTatggt CAGGGGGA m7b Created HHFKP_74051_cluster-11662_1_8
hsa-miR-4716-3p tggTCCCCCTatggt AAGGGGGA m7b Created HHFKP_74051_cluster-11662_1_8
hsa-miR-5010-5p tggTCCCCCTatggt AGGGGGAU m7a Created HHFKP_74051_cluster-11662_1_8
hsa-miR-625-5p tggTCCCCCTatggt AGGGGGAA m7a Created HHFKP_74051_cluster-11662_1_8
hsa-miR-3144-5p tGGTCCCCctatggt AGGGGACC m7b Created HHFKP_74051_cluster-11662_1_8
hsa-miR-4278 tggtCCCCCTAtggt CUAGGGGG m7b Created HHFKP_74051_cluster-11662_1_8

Mutation Mutation ID Sample Name Cancer Type
chr19:g.48414422C>A COSM1612520 HCC56 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4321 ctgtggtACCGCTAt UUAGCGGU m7b Created HHFKP_74051_cluster-11662_1_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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