SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_000831 |
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Gene Symbol: | GRIK3 |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr1:g.36891049G>A | COSM4007549 | TCGA-CG-5733-01 | [stomach][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4304 | catgaATGCCGagga | CCGGCAUG | m6b | Disrupted | HHHSE_7418_GRIK3|NM_000831|exon_CDS|-2.12841558045716|0.895988212071612 |
hsa-miR-4798-5p | catgaATACCGAgga | UUCGGUAU | m7b | Created | HHHSE_7418_GRIK3|NM_000831|exon_CDS|-2.12841558045716|0.895988212071612 |
hsa-miR-8088 | catgaaTACCGAGGa | CCUCGGUA | m8a | Created | HHHSE_7418_GRIK3|NM_000831|exon_CDS|-2.12841558045716|0.895988212071612 |
hsa-miR-4304 | catgaATGCCGagga | CCGGCAUG | m6b | Disrupted | HHHSE_7418_GRIK3|NM_000831|exon_CDS|-2.12841558045716|0.895988212071612 |
hsa-miR-4798-5p | catgaATACCGAgga | UUCGGUAU | m7b | Created | HHHSE_7418_GRIK3|NM_000831|exon_CDS|-2.12841558045716|0.895988212071612 |
hsa-miR-8088 | catgaaTACCGAGGa | CCUCGGUA | m8a | Created | HHHSE_7418_GRIK3|NM_000831|exon_CDS|-2.12841558045716|0.895988212071612 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.36891048C>A | COSM347960 | LUAD-VUMN6 | [lung][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4304 | atgaATGCCGaggag | CCGGCAUG | m6b | Disrupted | HHHSE_7418_GRIK3|NM_000831|exon_CDS|-2.12841558045716|0.895988212071612 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.36891043G>A | COSM4752981 | pfg144T | [stomach][NS][carcinoma][intestinal_adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-103a-2-5p | tgccgAGAAGCatgc | AGCUUCUU | m6b | Created | HHHSE_7418_GRIK3|NM_000831|exon_CDS|-2.12841558045716|0.895988212071612 |
hsa-miR-4268 | tgccGAGGAGCatgc | GGCUCCUC | m7b | Disrupted | HHHSE_7418_GRIK3|NM_000831|exon_CDS|-2.12841558045716|0.895988212071612 |
hsa-miR-4448 | tgccgAGGAGCatgc | GGCUCCUU | m6b | Disrupted | HHHSE_7418_GRIK3|NM_000831|exon_CDS|-2.12841558045716|0.895988212071612 |
hsa-miR-6772-3p | tgccgAGGAGCAtgc | UUGCUCCU | m7b | Disrupted | HHHSE_7418_GRIK3|NM_000831|exon_CDS|-2.12841558045716|0.895988212071612 |
hsa-miR-103a-2-5p | tgccgAGAAGCatgc | AGCUUCUU | m6b | Created | HHHSE_7418_GRIK3|NM_000831|exon_CDS|-2.12841558045716|0.895988212071612 |
hsa-miR-4268 | tgccGAGGAGCatgc | GGCUCCUC | m7b | Disrupted | HHHSE_7418_GRIK3|NM_000831|exon_CDS|-2.12841558045716|0.895988212071612 |
hsa-miR-4448 | tgccgAGGAGCatgc | GGCUCCUU | m6b | Disrupted | HHHSE_7418_GRIK3|NM_000831|exon_CDS|-2.12841558045716|0.895988212071612 |
hsa-miR-6772-3p | tgccgAGGAGCAtgc | UUGCUCCU | m7b | Disrupted | HHHSE_7418_GRIK3|NM_000831|exon_CDS|-2.12841558045716|0.895988212071612 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.36891040C>A | COSM1502681 | TCGA-95-7043-01 | [lung][right_upper_lobe][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4268 | cGAGGAGCatgcctt | GGCUCCUC | m7b | Disrupted | HHHSE_7418_GRIK3|NM_000831|exon_CDS|-2.12841558045716|0.895988212071612 |
hsa-miR-6772-3p | cgAGGAGCAtgcctt | UUGCUCCU | m7b | (m7b->m6b) | HHHSE_7418_GRIK3|NM_000831|exon_CDS|-2.12841558045716|0.895988212071612 |