SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000819
Gene Symbol: GART
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr21:g.33517125G>A COSM1030308 TCGA-D1-A16N-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3186-5p ttctcACGCCTacca CAGGCGUC m6b Disrupted HPRO6_50898_G60314.1_34889429
hsa-miR-3650 ttctCACACCTacca AGGUGUGU m7a Created HPRO6_50898_G60314.1_34889429

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33517071C>T COSM578927 TCGA-64-5778-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-302b-5p gacatGTTAAAGcct ACUUUAAC m7b Created HPRO6_50897_G60313.1_34889351
hsa-miR-302c-5p gacATGTTAAAgcct UUUAACAU m8a Created HPRO6_50897_G60313.1_34889351
hsa-miR-302d-5p gacatGTTAAAGcct ACUUUAAC m7b Created HPRO6_50897_G60313.1_34889351
hsa-miR-3143 gacATGTTAaagcct AUAACAUU m6b Created HPRO6_50897_G60313.1_34889351
hsa-miR-489-3p gacATGTCAaagcct GUGACAUC m6b Disrupted HPRO6_50897_G60313.1_34889351
hsa-miR-514a-3p gacaTGTCAAagcct AUUGACAC m6b Disrupted HPRO6_50897_G60313.1_34889351
hsa-miR-514b-3p gacaTGTCAAagcct AUUGACAC m6b Disrupted HPRO6_50897_G60313.1_34889351

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33517065C>A COSM3841795 TCGA-A7-A425-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-105-5p tcaaaGCATTTGccc UCAAAUGC m7b Created HPRO6_50897_G60313.1_34889351
hsa-miR-7853-5p tcaaaGCATTTGccc UCAAAUGC m7b Created HPRO6_50897_G60313.1_34889351

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33517061G>C COSM393489 LUAD-E00934 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2110 agcctTTCCCCAtat UUGGGGAA m7b Created HPRO6_50897_G60313.1_34889351
hsa-miR-3153 agcCTTTCCCCatat GGGGAAAG m8a Created HPRO6_50897_G60313.1_34889351
hsa-miR-4271 agcctTTCCCCatat GGGGGAAG m6b Created HPRO6_50897_G60313.1_34889351
hsa-miR-6733-5p agcCTTTCCCcatat UGGGAAAG m7b Created HPRO6_50897_G60313.1_34889351
hsa-miR-6739-5p agcCTTTCCCcatat UGGGAAAG m7b Created HPRO6_50897_G60313.1_34889351
hsa-miR-6810-5p agccttTCCCCATat AUGGGGAC m7a Created HPRO6_50897_G60313.1_34889351
hsa-miR-6890-5p agcctttCCCCATat CAUGGGGU m6b Created HPRO6_50897_G60313.1_34889351

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33517059C>T COSM3550360 TCGA-EE-A2GJ-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4517 cctttgcTCATATTa AAAUAUGA m7b Created HPRO6_50897_G60313.1_34889351
hsa-miR-556-5p cctttGCTCATatta GAUGAGCU m6b Created HPRO6_50897_G60313.1_34889351
hsa-miR-5583-3p cctttgcCCATATTa GAAUAUGG m7b Disrupted HPRO6_50897_G60313.1_34889351

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33517046G>A COSM4648444 RKO [large_intestine][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4691-5p tactggTGGAGGAtt GUCCUCCA m7b Disrupted HPRO6_50897_G60313.1_34889351
hsa-miR-4733-3p taCTGGTGGaggatt CCACCAGG m7a (m7a->m6a) HPRO6_50897_G60313.1_34889351
hsa-miR-6792-3p tactggTGGAGGAtt CUCCUCCA m7b Disrupted HPRO6_50897_G60313.1_34889351

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33517043G>T COSM4101306 TCGA-F1-6874-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4691-5p tggTGGAGGAttact GUCCUCCA m7b Disrupted HPRO6_50897_G60313.1_34889351
hsa-miR-6792-3p tggTGGAGGAttact CUCCUCCA m7b Disrupted HPRO6_50897_G60313.1_34889351

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33505591C>A COSM3841794 TCGA-AN-A046-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-186-5p gagaATTCTTTctgg CAAAGAAU m7b Disrupted HPRO6_50894_G60310.1_34877888
hsa-miR-5692a gagaATTATTTctgg CAAAUAAU m7b Created HPRO6_50894_G60310.1_34877888

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33505584G>A COSM3963922 J76_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3936 ctttctgACCCCTTt UAAGGGGU m7b Created HPRO6_50894_G60310.1_34877888
hsa-miR-4640-5p ctttCTGGCCCcttt UGGGCCAG m7b Disrupted HPRO6_50894_G60310.1_34877888
hsa-miR-4726-5p ctttCTGGCCCcttt AGGGCCAG m7b Disrupted HPRO6_50894_G60310.1_34877888
hsa-miR-6762-5p ctttcTGGCCCCttt CGGGGCCA m7b Disrupted HPRO6_50894_G60310.1_34877888
hsa-miR-6801-5p cttTCTGACCccttt UGGUCAGA m7b Created HPRO6_50894_G60310.1_34877888
hsa-miR-6845-5p ctttcTGGCCCCttt CGGGGCCA m7b Disrupted HPRO6_50894_G60310.1_34877888

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33504305A>T COSM4928655 TCGA-DD-A1EB-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-338-3p gatgtggATGCTGGa UCCAGCAU m7b Disrupted HPRO6_50893_G60309.1_34876607

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33504299G>A COSM1163293 PA285 [pancreas][NS][carcinoma][ductal_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-198 gatgCTGGACagatt GGUCCAGA m6b Disrupted HPRO6_50893_G60309.1_34876607
hsa-miR-26b-3p gatgctGAACAGatt CCUGUUCU m6b Created HPRO6_50893_G60309.1_34876607
hsa-miR-338-3p gATGCTGGAcagatt UCCAGCAU m8a (m8a->m7a) HPRO6_50893_G60309.1_34876607
hsa-miR-4530 gaTGCTGGacagatt CCCAGCAG m6b Disrupted HPRO6_50893_G60309.1_34876607
hsa-miR-7157-5p gATGCTGAacagatt UCAGCAUU m7a Created HPRO6_50893_G60309.1_34876607

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33504298A>G COSM1566084 TCGA-DC-5337-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-18a-3p atgctGGGCAGatta ACUGCCCU m6b Created HPRO6_50893_G60309.1_34876607
hsa-miR-198 atgCTGGACagatta GGUCCAGA m6b Disrupted HPRO6_50893_G60309.1_34876607
hsa-miR-324-3p atgctGGGCAGatta ACUGCCCC m6b Created HPRO6_50893_G60309.1_34876607
hsa-miR-338-3p ATGCTGGAcagatta UCCAGCAU m8a Disrupted HPRO6_50893_G60309.1_34876607

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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