SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000819
Gene Symbol: GART
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr21:g.33505654A>G COSM1616023 BN41 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-92b-3p caGTGCAATtgacct UAUUGCAC m7b (m7b->m6b) HPKMA_9557_G11057.1_34877952
hsa-miR-25-3p caGTGCAATtgacct CAUUGCAC m7b (m7b->m6b) HPKMA_9557_G11057.1_34877952
hsa-miR-32-5p caGTGCAATtgacct UAUUGCAC m7b (m7b->m6b) HPKMA_9557_G11057.1_34877952
hsa-miR-363-3p caGTGCAATTgacct AAUUGCAC m8a Disrupted HPKMA_9557_G11057.1_34877952
hsa-miR-367-3p caGTGCAATTgacct AAUUGCAC m8a Disrupted HPKMA_9557_G11057.1_34877952
hsa-miR-92a-3p caGTGCAATtgacct UAUUGCAC m7b (m7b->m6b) HPKMA_9557_G11057.1_34877952

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33504442A>T COSM1534292 TCGA-44-7661-01 [lung][right_lower_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-802 gagtcacTGTTACTg CAGUAACA m7b Created HPKMA_9556_G11056.1_34876733
hsa-miR-194-5p gagtcaCTGTTACtg UGUAACAG m7b Created HPKMA_9556_G11056.1_34876733
hsa-miR-5190 gaGTCACTGttactg CCAGUGAC m7b (m6b->m7b) HPKMA_9556_G11056.1_34876733

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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