SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_000819
Gene Symbol: GART
Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr21:g.33517508C>T COSM4644331 LIM2551 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6834-5p TCCCTCACctggaaa GUGAGGGA m8a Disrupted HHRBL_9320_BCBL1-2of3-SCL_5586
hsa-miR-525-5p tccctcaTCTGGAaa CUCCAGAG m6b Created HHRBL_9320_BCBL1-2of3-SCL_5586
hsa-miR-520a-5p tccctcaTCTGGAaa CUCCAGAG m6b Created HHRBL_9320_BCBL1-2of3-SCL_5586
hsa-miR-488-5p tccctcATCTGGaaa CCCAGAUA m6b Created HHRBL_9320_BCBL1-2of3-SCL_5586
hsa-miR-1245b-3p tcccTCATCTGgaaa UCAGAUGA m7b Created HHRBL_9320_BCBL1-2of3-SCL_5586
hsa-miR-4710 tcCCTCACCtggaaa GGGUGAGG m7b (m7b->m6b) HHRBL_9320_BCBL1-2of3-SCL_5586
hsa-miR-3180-5p tccctcaTCTGGAAa CUUCCAGA m7b Created HHRBL_9320_BCBL1-2of3-SCL_5586
hsa-miR-125a-3p tcccTCACCTGgaaa ACAGGUGA m7b Disrupted HHRBL_9320_BCBL1-2of3-SCL_5586

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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