SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000819
Gene Symbol: GART
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr21:g.33506072C>T COSM3550358 TCGA-EE-A2GD-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4740-3p cagtaCTCGGGaacc GCCCGAGA m6b Disrupted HHKTA_16744_NM_001136005|2784|2823|4.28352616412396|2.4882162265569
hsa-miR-6814-5p cagtaCTTGGGAacc UCCCAAGG m7a Created HHKTA_16744_NM_001136005|2784|2823|4.28352616412396|2.4882162265569

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33506071G>A COSM4686423 T3262 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1200 agtaCTCAGGAacca CUCCUGAG m7b Created HHKTA_16744_NM_001136005|2784|2823|4.28352616412396|2.4882162265569
hsa-miR-378a-5p agtacTCAGGAacca CUCCUGAC m6b Created HHKTA_16744_NM_001136005|2784|2823|4.28352616412396|2.4882162265569
hsa-miR-4324 agtaCTCAGGaacca CCCUGAGA m6b Created HHKTA_16744_NM_001136005|2784|2823|4.28352616412396|2.4882162265569
hsa-miR-4740-3p agtaCTCGGGaacca GCCCGAGA m6b Disrupted HHKTA_16744_NM_001136005|2784|2823|4.28352616412396|2.4882162265569
hsa-miR-544b agtaCTCAGGaacca ACCUGAGG m6b Created HHKTA_16744_NM_001136005|2784|2823|4.28352616412396|2.4882162265569
hsa-miR-642b-5p agtactcGGGAACCa GGUUCCCU m7a Disrupted HHKTA_16744_NM_001136005|2784|2823|4.28352616412396|2.4882162265569

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33506069G>C COSM4823792 TCGA-JW-A852-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-218-1-3p tactcgGGAACCAaa AUGGUUCC m7b Disrupted HHKTA_16744_NM_001136005|2784|2823|4.28352616412396|2.4882162265569
hsa-miR-4740-3p taCTCGGGaaccaaa GCCCGAGA m6b Disrupted HHKTA_16744_NM_001136005|2784|2823|4.28352616412396|2.4882162265569
hsa-miR-642b-5p tactcGGGAACCaaa GGUUCCCU m7a Disrupted HHKTA_16744_NM_001136005|2784|2823|4.28352616412396|2.4882162265569
hsa-miR-656-5p tactcGGCAACCaaa AGGUUGCC m7b Created HHKTA_16744_NM_001136005|2784|2823|4.28352616412396|2.4882162265569
hsa-miR-659-3p tactcggGAACCAAa CUUGGUUC m7b Disrupted HHKTA_16744_NM_001136005|2784|2823|4.28352616412396|2.4882162265569

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33506065C>A COSM4807087 PCSI_0297_Pa_P_526 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-218-1-3p cgGGAACCAaatagc AUGGUUCC m7b (m7b->m6b) HHKTA_16744_NM_001136005|2784|2823|4.28352616412396|2.4882162265569
hsa-miR-375 cggGAACAAAatagc UUUGUUCG m7a Created HHKTA_16744_NM_001136005|2784|2823|4.28352616412396|2.4882162265569
hsa-miR-5002-5p cgggaACCAAATagc AAUUUGGU m7b Disrupted HHKTA_16744_NM_001136005|2784|2823|4.28352616412396|2.4882162265569
hsa-miR-642b-5p cGGGAACCaaatagc GGUUCCCU m7a Disrupted HHKTA_16744_NM_001136005|2784|2823|4.28352616412396|2.4882162265569
hsa-miR-659-3p cggGAACCAAatagc CUUGGUUC m7b Disrupted HHKTA_16744_NM_001136005|2784|2823|4.28352616412396|2.4882162265569
hsa-miR-6739-3p cggGAACAAaatagc AUUGUUCU m6b Created HHKTA_16744_NM_001136005|2784|2823|4.28352616412396|2.4882162265569

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33506045G>A COSM1751609 B74-Tumor [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-16-2-3p acaaattAATATTGt CCAAUAUU m7b Created HHKTA_16744_NM_001136005|2784|2823|4.28352616412396|2.4882162265569
hsa-miR-195-3p acaaattAATATTGt CCAAUAUU m7b Created HHKTA_16744_NM_001136005|2784|2823|4.28352616412396|2.4882162265569

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33505591C>A COSM3841794 TCGA-AN-A046-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-186-5p gagaATTCTTTctgg CAAAGAAU m7b Disrupted HHKTA_32261_NM_001136005|2990|3029|2.29320087574313|2.4882162265569
hsa-miR-5692a gagaATTATTTctgg CAAAUAAU m7b Created HHKTA_32261_NM_001136005|2990|3029|2.29320087574313|2.4882162265569

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33505584G>A COSM3963922 J76_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3936 ctttctgACCCCTTt UAAGGGGU m7b Created HHKTA_32261_NM_001136005|2990|3029|2.29320087574313|2.4882162265569
hsa-miR-4640-5p ctttCTGGCCCcttt UGGGCCAG m7b Disrupted HHKTA_32261_NM_001136005|2990|3029|2.29320087574313|2.4882162265569
hsa-miR-4726-5p ctttCTGGCCCcttt AGGGCCAG m7b Disrupted HHKTA_32261_NM_001136005|2990|3029|2.29320087574313|2.4882162265569
hsa-miR-6762-5p ctttcTGGCCCCttt CGGGGCCA m7b Disrupted HHKTA_32261_NM_001136005|2990|3029|2.29320087574313|2.4882162265569
hsa-miR-6801-5p cttTCTGACCccttt UGGUCAGA m7b Created HHKTA_32261_NM_001136005|2990|3029|2.29320087574313|2.4882162265569
hsa-miR-6845-5p ctttcTGGCCCCttt CGGGGCCA m7b Disrupted HHKTA_32261_NM_001136005|2990|3029|2.29320087574313|2.4882162265569

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33505567T>G COSM3991907 TCGA-DZ-6131-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3127-3p ccaaAAGGGGAatgg UCCCCUUC m7a Created HHKTA_32261_NM_001136005|2990|3029|2.29320087574313|2.4882162265569
hsa-miR-4436b-5p ccaaAAGTGGAatgg GUCCACUU m7b Disrupted HHKTA_32261_NM_001136005|2990|3029|2.29320087574313|2.4882162265569
hsa-miR-6756-3p ccaaAAGGGGAatgg UCCCCUUC m7a Created HHKTA_32261_NM_001136005|2990|3029|2.29320087574313|2.4882162265569
hsa-miR-6826-3p ccaaaAGGGGAatgg CUCCCCUC m6b Created HHKTA_32261_NM_001136005|2990|3029|2.29320087574313|2.4882162265569
hsa-miR-6832-3p ccAAAAGGGgaatgg ACCCUUUU m7b (m6b->m7b) HHKTA_32261_NM_001136005|2990|3029|2.29320087574313|2.4882162265569

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33504451C>T COSM1534291 TCGA-69-7979-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-145-5p tggaAACTGGAgtca GUCCAGUU m7b Created HHKTA_39205_NM_001136005|3090|3129|1.94705734732907|2.4882162265569
hsa-miR-3925-3p tggaaACTGGAGTca ACUCCAGU m8a Created HHKTA_39205_NM_001136005|3090|3129|1.94705734732907|2.4882162265569
hsa-miR-4328 tggAAACTGGagtca CCAGUUUU m7a Created HHKTA_39205_NM_001136005|3090|3129|1.94705734732907|2.4882162265569
hsa-miR-508-5p tggaaaCTGGAGTca UACUCCAG m7b Created HHKTA_39205_NM_001136005|3090|3129|1.94705734732907|2.4882162265569
hsa-miR-5195-3p tggaAACTGGAgtca AUCCAGUU m7b Created HHKTA_39205_NM_001136005|3090|3129|1.94705734732907|2.4882162265569

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33504450G>A COSM4101304 TCGA-CG-5721-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-29b-1-5p ggAAACCAGagtcac GCUGGUUU m7b (m6b->m7b) HHKTA_39205_NM_001136005|3090|3129|1.94705734732907|2.4882162265569
hsa-miR-29b-2-5p gGAAACCAGagtcac CUGGUUUC m8a (m7a->m8a) HHKTA_39205_NM_001136005|3090|3129|1.94705734732907|2.4882162265569
hsa-miR-4522 ggaaacCAGAGTCAc UGACUCUG m8a Created HHKTA_39205_NM_001136005|3090|3129|1.94705734732907|2.4882162265569
hsa-miR-514a-5p ggaaaCCAGAGTcac UACUCUGG m7b Created HHKTA_39205_NM_001136005|3090|3129|1.94705734732907|2.4882162265569
hsa-miR-6764-3p ggaaACCAGAGtcac UCUCUGGU m7b Created HHKTA_39205_NM_001136005|3090|3129|1.94705734732907|2.4882162265569
hsa-miR-6824-3p ggaaACCAGAGtcac UCUCUGGU m7b Created HHKTA_39205_NM_001136005|3090|3129|1.94705734732907|2.4882162265569

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33504447G>A COSM1285121 TARGET-30-PASXNN [autonomic_ganglia][NS][neuroblastoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-145-3p aaccGGAATCacagt GGAUUCCU m6b Created HHKTA_39205_NM_001136005|3090|3129|1.94705734732907|2.4882162265569
hsa-miR-4664-3p aACCGGAAtcacagt CUUCCGGU m7b Created HHKTA_39205_NM_001136005|3090|3129|1.94705734732907|2.4882162265569
hsa-miR-4679 aaccggaATCACAGt UCUGUGAU m7b Created HHKTA_39205_NM_001136005|3090|3129|1.94705734732907|2.4882162265569
hsa-miR-8070 aaccggAATCACAgt AUGUGAUU m7b Created HHKTA_39205_NM_001136005|3090|3129|1.94705734732907|2.4882162265569

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33504442A>T COSM1534292 TCGA-44-7661-01 [lung][right_lower_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-194-5p gagtcaCTGTTACtg UGUAACAG m7b Created HHKTA_39205_NM_001136005|3090|3129|1.94705734732907|2.4882162265569
hsa-miR-5190 gaGTCACTGttactg CCAGUGAC m7b (m6b->m7b) HHKTA_39205_NM_001136005|3090|3129|1.94705734732907|2.4882162265569
hsa-miR-802 gagtcacTGTTACTg CAGUAACA m7b Created HHKTA_39205_NM_001136005|3090|3129|1.94705734732907|2.4882162265569

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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