SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000819
Gene Symbol: GART
Browse Pathways

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33505679A>G COSM2843663 Gp5D [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33505677A>G COSM4619510 C70 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr21:g.33505675C>T COSM4482494 CSCC-27-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4731-3p taaaaaTTGTGTaga CACACAAG m6b Created HHHNH_1331_GART|NM_000819|exon_CDS|-7.63878769689765|0.660862602950026

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33505665T>G COSM4402615 TCGA-D9-A6EC-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6773-3p gtagaatGTGACAGt ACUGUCAC m7b Created HHHNH_1331_GART|NM_000819|exon_CDS|-7.63878769689765|0.660862602950026
hsa-miR-23c gtagAATGTGAcagt AUCACAUU m7b Created HHHNH_1331_GART|NM_000819|exon_CDS|-7.63878769689765|0.660862602950026
hsa-miR-23b-3p gtagAATGTGAcagt AUCACAUU m7b Created HHHNH_1331_GART|NM_000819|exon_CDS|-7.63878769689765|0.660862602950026
hsa-miR-23a-3p gtagAATGTGAcagt AUCACAUU m7b Created HHHNH_1331_GART|NM_000819|exon_CDS|-7.63878769689765|0.660862602950026
hsa-miR-130a-5p gtagAATGTGAcagt UUCACAUU m7b Created HHHNH_1331_GART|NM_000819|exon_CDS|-7.63878769689765|0.660862602950026
hsa-miR-10a-3p gtaGAATTTGacagt CAAAUUCG m7a Disrupted HHHNH_1331_GART|NM_000819|exon_CDS|-7.63878769689765|0.660862602950026

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33505654A>G COSM1616023 BN41 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-367-3p caGTGCAATTgacct AAUUGCAC m8a Disrupted HHHNH_1331_GART|NM_000819|exon_CDS|-7.63878769689765|0.660862602950026
hsa-miR-363-3p caGTGCAATTgacct AAUUGCAC m8a Disrupted HHHNH_1331_GART|NM_000819|exon_CDS|-7.63878769689765|0.660862602950026
hsa-miR-32-5p caGTGCAATtgacct UAUUGCAC m7b (m7b->m6b) HHHNH_1331_GART|NM_000819|exon_CDS|-7.63878769689765|0.660862602950026
hsa-miR-25-3p caGTGCAATtgacct CAUUGCAC m7b (m7b->m6b) HHHNH_1331_GART|NM_000819|exon_CDS|-7.63878769689765|0.660862602950026
hsa-miR-92a-3p caGTGCAATtgacct UAUUGCAC m7b (m7b->m6b) HHHNH_1331_GART|NM_000819|exon_CDS|-7.63878769689765|0.660862602950026
hsa-miR-92b-3p caGTGCAATtgacct UAUUGCAC m7b (m7b->m6b) HHHNH_1331_GART|NM_000819|exon_CDS|-7.63878769689765|0.660862602950026

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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