SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000819
Gene Symbol: GART
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr21:g.33505665T>G COSM4402615 TCGA-D9-A6EC-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-130a-5p gtagAATGTGAcagt UUCACAUU m7b Created HHHNA_15174_GART|NM_000819|exon_CDS|-4.57002943475519|2.69371208773369
hsa-miR-23a-3p gtagAATGTGAcagt AUCACAUU m7b Created HHHNA_15174_GART|NM_000819|exon_CDS|-4.57002943475519|2.69371208773369
hsa-miR-23b-3p gtagAATGTGAcagt AUCACAUU m7b Created HHHNA_15174_GART|NM_000819|exon_CDS|-4.57002943475519|2.69371208773369
hsa-miR-23c gtagAATGTGAcagt AUCACAUU m7b Created HHHNA_15174_GART|NM_000819|exon_CDS|-4.57002943475519|2.69371208773369
hsa-miR-10a-3p gtaGAATTTGacagt CAAAUUCG m7a Disrupted HHHNA_15174_GART|NM_000819|exon_CDS|-4.57002943475519|2.69371208773369
hsa-miR-6773-3p gtagaatGTGACAGt ACUGUCAC m7b Created HHHNA_15174_GART|NM_000819|exon_CDS|-4.57002943475519|2.69371208773369

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33505654A>G COSM1616023 BN41 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-25-3p caGTGCAATtgacct CAUUGCAC m7b (m7b->m6b) HHHNA_15174_GART|NM_000819|exon_CDS|-4.57002943475519|2.69371208773369
hsa-miR-32-5p caGTGCAATtgacct UAUUGCAC m7b (m7b->m6b) HHHNA_15174_GART|NM_000819|exon_CDS|-4.57002943475519|2.69371208773369
hsa-miR-363-3p caGTGCAATTgacct AAUUGCAC m8a Disrupted HHHNA_15174_GART|NM_000819|exon_CDS|-4.57002943475519|2.69371208773369
hsa-miR-367-3p caGTGCAATTgacct AAUUGCAC m8a Disrupted HHHNA_15174_GART|NM_000819|exon_CDS|-4.57002943475519|2.69371208773369
hsa-miR-92a-3p caGTGCAATtgacct UAUUGCAC m7b (m7b->m6b) HHHNA_15174_GART|NM_000819|exon_CDS|-4.57002943475519|2.69371208773369
hsa-miR-92b-3p caGTGCAATtgacct UAUUGCAC m7b (m7b->m6b) HHHNA_15174_GART|NM_000819|exon_CDS|-4.57002943475519|2.69371208773369

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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