SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000791
Gene Symbol: DHFR
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.80652070T>C COSN523884 TCGA-BH-A18H-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8068 caccccACAAACAaa UGUUUGUU m7a Created HPRO6_62952_G75351.1_79947896
hsa-miR-6890-5p cACCCCATaaacaaa CAUGGGGU m7b Disrupted HPRO6_62952_G75351.1_79947896
hsa-miR-6812-5p CACCCCATaaacaaa AUGGGGUG m8a Disrupted HPRO6_62952_G75351.1_79947896
hsa-miR-6796-5p caCCCCACAAacaaa UUGUGGGG m8a Created HPRO6_62952_G75351.1_79947896
hsa-miR-6759-5p cacCCCACAAacaaa UUGUGGGU m7a Created HPRO6_62952_G75351.1_79947896
hsa-miR-6742-5p cACCCCACaaacaaa AGUGGGGU m7b Created HPRO6_62952_G75351.1_79947896
hsa-miR-491-5p caCCCCACaaacaaa AGUGGGGA m6b Created HPRO6_62952_G75351.1_79947896
hsa-miR-3115 cacCCCATAaacaaa AUAUGGGU m6b Disrupted HPRO6_62952_G75351.1_79947896
hsa-miR-3151-5p caCCCCACaaacaaa GGUGGGGC m6b Created HPRO6_62952_G75351.1_79947896
hsa-miR-3675-5p caCCCCATAaacaaa UAUGGGGC m7a (m7a->m6a) HPRO6_62952_G75351.1_79947896
hsa-miR-4265 cacCCCACAaacaaa CUGUGGGC m6b Created HPRO6_62952_G75351.1_79947896
hsa-miR-4296 cacCCCACAaacaaa AUGUGGGC m6b Created HPRO6_62952_G75351.1_79947896
hsa-miR-4322 cacCCCACAaacaaa CUGUGGGC m6b Created HPRO6_62952_G75351.1_79947896
hsa-miR-4447 caCCCCACaaacaaa GGUGGGGG m6b Created HPRO6_62952_G75351.1_79947896
hsa-miR-4472 caCCCCACaaacaaa GGUGGGGG m6b Created HPRO6_62952_G75351.1_79947896

Mutation Mutation ID Sample Name Cancer Type
chr5:g.80633961T>C COSM4405036 TCGA-D9-A6EC-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-522-3p cttaaACCATTTgtg AAAAUGGU m7b Created HPRO6_62929_G75330.1_79929771
hsa-miR-224-3p cttaaACCATTTgtg AAAAUGGU m7b Created HPRO6_62929_G75330.1_79929771

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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