SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions
	Home	Search	Help	Download

Prediction criteria:	TargetScan sites only     All 6mer or longer seed matches

Transcript ID:	NM_000788
Gene Symbol:	DCK
Browse Pathways

Somatic mutations that impact miRNA target sites

Mutation		Mutation ID	Sample Name	Cancer Type
chr4:g.71022382C>T		COSM4841987	TCGA-C5-A1BQ-01	[cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID
hsa-miR-4251	aatgTCTCAGaaaaa	CCUGAGAA	m6b	Disrupted	HPRO6_57192_G68156.1_71888094
hsa-miR-4263	aatgtCTTAGAAaaa	AUUCUAAG	m7b	Created	HPRO6_57192_G68156.1_71888094
hsa-miR-4303	aatgtCTCAGAAaaa	UUCUGAGC	m7a	Disrupted	HPRO6_57192_G68156.1_71888094
hsa-miR-3617-5p	aATGTCTTagaaaaa	AAAGACAU	m7b	Created	HPRO6_57192_G68156.1_71888094
hsa-miR-4329	aatGTCTCAGaaaaa	CCUGAGAC	m7b	Disrupted	HPRO6_57192_G68156.1_71888094
hsa-miR-6761-5p	aatgTCTCAGAaaaa	UCUGAGAG	m7a	Disrupted	HPRO6_57192_G68156.1_71888094
hsa-miR-641	aATGTCTTagaaaaa	AAAGACAU	m7b	Created	HPRO6_57192_G68156.1_71888094
hsa-miR-576-5p	aatgtcTTAGAAaaa	AUUCUAAU	m6b	Created	HPRO6_57192_G68156.1_71888094
hsa-miR-4762-3p	aatgtcTCAGAAaaa	CUUCUGAU	m6b	Disrupted	HPRO6_57192_G68156.1_71888094

Mutation		Mutation ID	Sample Name	Cancer Type
chr4:g.71022375A>G		COSM1430824	TCGA-AZ-4681-01	[large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation		Mutation ID	Sample Name	Cancer Type
chr4:g.71022373A>T		COSM1430823	TCGA-A6-6782-01	[large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation		Mutation ID	Sample Name	Cancer Type
chr4:g.71022373A>G		COSM74332	TCGA-23-1021-01	[ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation		Mutation ID	Sample Name	Cancer Type
chr4:g.71022369A>G		COSM4941729	TCGA-G3-A25T-01	[liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID
hsa-miR-6796-3p	aatagGAGCTTacaa	GAAGCUCU	m6b	Created	HPRO6_57192_G68156.1_71888094
hsa-miR-99a-3p	aatagGAGCTTacaa	CAAGCUCG	m6b	Created	HPRO6_57192_G68156.1_71888094
hsa-miR-99b-3p	aatagGAGCTTacaa	CAAGCUCG	m6b	Created	HPRO6_57192_G68156.1_71888094
hsa-miR-148a-5p	aatagGAACTTacaa	AAAGUUCU	m6b	Disrupted	HPRO6_57192_G68156.1_71888094

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser