SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000788
Gene Symbol: DCK
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.71030650G>A COSN5156192 PD4115a [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5000-5p accttaTGAACTaca CAGUUCAG m6b Disrupted HPCB1_29346_G37446.1_71896367

Mutation Mutation ID Sample Name Cancer Type
chr4:g.71022382C>T COSM4841987 TCGA-C5-A1BQ-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4329 aatGTCTCAGaaaaa CCUGAGAC m7b Disrupted HPCB1_29341_G37441.1_71888097
hsa-miR-4303 aatgtCTCAGAAaaa UUCUGAGC m7a Disrupted HPCB1_29341_G37441.1_71888097
hsa-miR-4263 aatgtCTTAGAAaaa AUUCUAAG m7b Created HPCB1_29341_G37441.1_71888097
hsa-miR-4251 aatgTCTCAGaaaaa CCUGAGAA m6b Disrupted HPCB1_29341_G37441.1_71888097
hsa-miR-3617-5p aATGTCTTagaaaaa AAAGACAU m7b Created HPCB1_29341_G37441.1_71888097
hsa-miR-4762-3p aatgtcTCAGAAaaa CUUCUGAU m6b Disrupted HPCB1_29341_G37441.1_71888097
hsa-miR-576-5p aatgtcTTAGAAaaa AUUCUAAU m6b Created HPCB1_29341_G37441.1_71888097
hsa-miR-641 aATGTCTTagaaaaa AAAGACAU m7b Created HPCB1_29341_G37441.1_71888097
hsa-miR-6761-5p aatgTCTCAGAaaaa UCUGAGAG m7a Disrupted HPCB1_29341_G37441.1_71888097
Mutation Mutation ID Sample Name Cancer Type
chr4:g.71022375A>G COSM1430824 TCGA-AZ-4681-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation Mutation ID Sample Name Cancer Type
chr4:g.71022373A>T COSM1430823 TCGA-A6-6782-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation Mutation ID Sample Name Cancer Type
chr4:g.71022373A>G COSM74332 TCGA-23-1021-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr4:g.71022369A>G COSM4941729 TCGA-G3-A25T-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-148a-5p aatagGAACTTacaa AAAGUUCU m6b Disrupted HPCB1_29341_G37441.1_71888097
hsa-miR-6796-3p aatagGAGCTTacaa GAAGCUCU m6b Created HPCB1_29341_G37441.1_71888097
hsa-miR-99a-3p aatagGAGCTTacaa CAAGCUCG m6b Created HPCB1_29341_G37441.1_71888097
hsa-miR-99b-3p aatagGAGCTTacaa CAAGCUCG m6b Created HPCB1_29341_G37441.1_71888097

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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