| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| Transcript ID: | NM_000745 |
|---|---|
| Gene Symbol: | CHRNA5 |
| Browse Associations | |
| Browse Pathways | |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr15:g.78590593G>A | COSM167539 | TCGA-AG-A002-01 | [large_intestine][rectum][carcinoma][adenocarcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-7852-3p | tctattcACTACATt | UAUGUAGU | m7b | Created | HPRO6_27261_G32138.1_78882932 |
| hsa-miR-6073 | tctatTCACTACatt | GGUAGUGA | m7b | Created | HPRO6_27261_G32138.1_78882932 |
| hsa-miR-5585-3p | tCTATTCActacatt | CUGAAUAG | m7b | Created | HPRO6_27261_G32138.1_78882932 |
| hsa-miR-3606-5p | tctaTTCACTAcatt | UUAGUGAA | m7b | Created | HPRO6_27261_G32138.1_78882932 |
| hsa-miR-1257 | tctATTCACTacatt | AGUGAAUG | m7a | Created | HPRO6_27261_G32138.1_78882932 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr15:g.78590583G>A | COSM3736134 | TCGA-AM-5820-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-219a-2-3p | tgcgctCAATTCTat | AGAAUUGU | m7a | Created | HPRO6_27261_G32138.1_78882932 |
| hsa-miR-5708 | tgCGCTCAattctat | AUGAGCGA | m6b | Created | HPRO6_27261_G32138.1_78882932 |
| hsa-miR-219b-3p | tgcgctCAATTCTat | AGAAUUGC | m7a | Created | HPRO6_27261_G32138.1_78882932 |