SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_000745 |
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Gene Symbol: | CHRNA5 |
Browse Associations | |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr15:g.78590085G>A | COSM1740209 | MAVER-1 | [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][mantle_cell_lymphoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-659-3p | caGAACCAAcagctg | CUUGGUUC | m7b | (m6b->m7b) | HHFKP_51201_uc002bdy.1_3_8 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.78580904AC>A | COSM1374791 | TCGA-AA-3663-01 | [large_intestine][caecum][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-125a-3p | gtggaaCACCTGaatg | ACAGGUGA | m6b | Disrupted | HHFKP_51199_uc002bdy.1_1_25 |
hsa-miR-3934-5p | gtggaACACCTGAatg | UCAGGUGU | m8a | Disrupted | HHFKP_51199_uc002bdy.1_1_25 |
hsa-miR-4255 | gtgGAACACTGaatg | CAGUGUUC | m8a | Created | HHFKP_51199_uc002bdy.1_1_25 |
hsa-miR-4276 | gtggaaCACTGAatg | CUCAGUGA | m6b | Created | HHFKP_51199_uc002bdy.1_1_25 |
hsa-miR-6733-3p | gtggaACACTGAatg | UCAGUGUC | m7a | Created | HHFKP_51199_uc002bdy.1_1_25 |
hsa-miR-764 | gtggaaCACCTGaatg | GCAGGUGC | m6b | Disrupted | HHFKP_51199_uc002bdy.1_1_25 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.78580896T>A | COSM3504314 | TCGA-EE-A2GC-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1273g-3p | ttcgtcCAGTGGaac | ACCACUGC | m6b | Created | HHFKP_51199_uc002bdy.1_1_25 |
hsa-miR-181a-2-3p | ttcgtcCAGTGGaac | ACCACUGA | m6b | Created | HHFKP_51199_uc002bdy.1_1_25 |
hsa-miR-3654 | ttcGTCCAGTggaac | GACUGGAC | m7b | Created | HHFKP_51199_uc002bdy.1_1_25 |
hsa-miR-3692-3p | ttcgtccTGTGGAAc | GUUCCACA | m7b | Disrupted | HHFKP_51199_uc002bdy.1_1_25 |
hsa-miR-4436b-5p | ttcgtccAGTGGAac | GUCCACUU | m6b | Created | HHFKP_51199_uc002bdy.1_1_25 |
hsa-miR-4700-3p | ttcGTCCTGTGgaac | CACAGGAC | m8a | Disrupted | HHFKP_51199_uc002bdy.1_1_25 |
hsa-miR-6509-3p | ttcgtcCAGTGGAAc | UUCCACUG | m8a | Created | HHFKP_51199_uc002bdy.1_1_25 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.78580895C>A | COSM4672268 | T3024 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4700-3p | gttcGTCCTGTGgaa | CACAGGAC | m8a | Disrupted | HHFKP_51199_uc002bdy.1_1_25 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.78580891C>T | COSM3504313 | TCGA-FS-A1ZZ-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1273d | ATGGGTTCgtcctgt | GAACCCAU | m8a | Disrupted | HHFKP_51199_uc002bdy.1_1_25 |
hsa-miR-4436a | atgggttTGTCCTGt | GCAGGACA | m7b | Created | HHFKP_51199_uc002bdy.1_1_25 |
hsa-miR-5000-3p | atgggttTGTCCTGt | UCAGGACA | m7b | Created | HHFKP_51199_uc002bdy.1_1_25 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr15:g.78580879G>A | COSM3504312 | T1764 | [large_intestine][rectum][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3674 | agaCTACAAaagatg | AUUGUAGA | m6b | Created | HHFKP_51199_uc002bdy.1_1_25 |