SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000712
Gene Symbol: BLVRA
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr7:g.43807179C>T COSM3923638 TCGA-FW-A3R5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3666 acgcatcTTGCACTg CAGUGCAA m7b Created HHFKP_134702_uc003tir.1_8_10
hsa-miR-301b-3p acgcatcTTGCACTg CAGUGCAA m7b Created HHFKP_134702_uc003tir.1_8_10
hsa-miR-301a-3p acgcatcTTGCACTg CAGUGCAA m7b Created HHFKP_134702_uc003tir.1_8_10
hsa-miR-130b-3p acgcatcTTGCACTg CAGUGCAA m7b Created HHFKP_134702_uc003tir.1_8_10
hsa-miR-130a-3p acgcatcTTGCACTg CAGUGCAA m7b Created HHFKP_134702_uc003tir.1_8_10
hsa-miR-4722-5p acgcaTCCTGCactg GGCAGGAG m6b Disrupted HHFKP_134702_uc003tir.1_8_10
hsa-miR-454-3p acgcatcTTGCACTg UAGUGCAA m7b Created HHFKP_134702_uc003tir.1_8_10
hsa-miR-4295 acgcatcTTGCACTg CAGUGCAA m7b Created HHFKP_134702_uc003tir.1_8_10
Mutation Mutation ID Sample Name Cancer Type
chr7:g.43807020A>C COSM3881130 TCGA-BR-8680-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr7:g.43807019A>G COSM1450845 TCGA-F4-6569-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1468-5p taAAACGGAacagat CUCCGUUU m7b (m6b->m7b) HHFKP_134701_uc003tir.1_7_38
hsa-miR-26b-3p taaaacgGAACAGat CCUGUUCU m6b Created HHFKP_134701_uc003tir.1_7_38

Mutation Mutation ID Sample Name Cancer Type
chr7:g.43807017C>T COSM79143 TCGA-24-0982-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1250-3p tctAAAATGaaacag ACAUUUUC m6b Created HHFKP_134701_uc003tir.1_7_38
hsa-miR-153-5p tctAAAATGAaacag UCAUUUUU m7a Created HHFKP_134701_uc003tir.1_7_38
hsa-miR-5696 tctaAAATGAaacag CUCAUUUA m6b Created HHFKP_134701_uc003tir.1_7_38
hsa-miR-579-3p tctaAAATGAAacag UUCAUUUG m7a Created HHFKP_134701_uc003tir.1_7_38
hsa-miR-664b-3p tctaAAATGAAacag UUCAUUUG m7a Created HHFKP_134701_uc003tir.1_7_38

Mutation Mutation ID Sample Name Cancer Type
chr7:g.43807001A>T COSM3768378 RK210_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1250-3p aaGAAAATGgacctg ACAUUUUC m7b (m6b->m7b) HHFKP_134701_uc003tir.1_7_38

Mutation Mutation ID Sample Name Cancer Type
chr7:g.43807001A>C COSM4164338 AOCS-149-1-7 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1468-5p aagaAAACGGAcctg CUCCGUUU m7b Created HHFKP_134701_uc003tir.1_7_38

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser