SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000701
Gene Symbol: ATP1A1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.116373271A>G COSM4004722 AOCS-167-16-X [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6799-3p ggcGCAGGGCAgcgg UGCCCUGC m8a Created HHHNE_1500_ATP1A1|NM_000701|exon_utr5|-7.57251668373484|2.60566552906593
hsa-miR-6805-3p ggcgCAGAGCAgcgg UUGCUCUG m7b Disrupted HHHNE_1500_ATP1A1|NM_000701|exon_utr5|-7.57251668373484|2.60566552906593
hsa-miR-874-3p ggcgCAGGGCAGcgg CUGCCCUG m8a Created HHHNE_1500_ATP1A1|NM_000701|exon_utr5|-7.57251668373484|2.60566552906593
hsa-miR-3173-5p ggcGCAGGGCAgcgg UGCCCUGC m8a Created HHHNE_1500_ATP1A1|NM_000701|exon_utr5|-7.57251668373484|2.60566552906593
hsa-miR-18a-3p ggcgcAGGGCAGcgg ACUGCCCU m7b Created HHHNE_1500_ATP1A1|NM_000701|exon_utr5|-7.57251668373484|2.60566552906593
hsa-miR-3194-3p ggcGCAGAGCagcgg AGCUCUGC m7b Disrupted HHHNE_1500_ATP1A1|NM_000701|exon_utr5|-7.57251668373484|2.60566552906593
hsa-miR-5691 ggcgCAGAGCAgcgg UUGCUCUG m7b Disrupted HHHNE_1500_ATP1A1|NM_000701|exon_utr5|-7.57251668373484|2.60566552906593

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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