SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000684
Gene Symbol: ADRB1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.114044786C>T COSM3866542 TCGA-FW-A3R5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4504 gcgactTTGTCACca UGUGACAA m7b Created HHFKP_21966_uc001lba.1_1_405

Mutation Mutation ID Sample Name Cancer Type
chr10:g.114044770C>A COSM166983 TCGA-AG-A02N-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6500-3p aacgaccACAAGTGc ACACUUGU m7b Created HHFKP_21966_uc001lba.1_1_405
hsa-miR-615-5p aacGACCCCaagtgc GGGGGUCC m6b Disrupted HHFKP_21966_uc001lba.1_1_405
hsa-miR-6812-5p aacgACCCCAagtgc AUGGGGUG m6b Disrupted HHFKP_21966_uc001lba.1_1_405
hsa-miR-7704 aaCGACCCCaagtgc CGGGGUCG m7b (m7b->m6b) HHFKP_21966_uc001lba.1_1_405
hsa-miR-5572 aacgACCCCAAgtgc GUUGGGGU m7b Disrupted HHFKP_21966_uc001lba.1_1_405
hsa-miR-3170 aacgACCCCAagtgc CUGGGGUU m6b Disrupted HHFKP_21966_uc001lba.1_1_405
hsa-miR-3614-5p aacgaccCCAAGTGc CCACUUGG m7b Disrupted HHFKP_21966_uc001lba.1_1_405

Mutation Mutation ID Sample Name Cancer Type
chr10:g.114044766G>A COSM3434280 TCGA-GN-A266-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-193b-5p ctacaacAACCCCaa CGGGGUUU m6b Created HHFKP_21966_uc001lba.1_1_405
hsa-miR-3170 ctacaacAACCCCAa CUGGGGUU m7b Created HHFKP_21966_uc001lba.1_1_405
hsa-miR-3613-5p cTACAACAaccccaa UGUUGUAC m7a Created HHFKP_21966_uc001lba.1_1_405
hsa-miR-615-5p ctacaacGACCCCaa GGGGGUCC m6b Disrupted HHFKP_21966_uc001lba.1_1_405
hsa-miR-6855-5p ctacaacAACCCCAa UUGGGGUU m7b Created HHFKP_21966_uc001lba.1_1_405
hsa-miR-7704 ctacaaCGACCCCaa CGGGGUCG m7b Disrupted HHFKP_21966_uc001lba.1_1_405

Mutation Mutation ID Sample Name Cancer Type
chr10:g.114044765C>T COSM4660140 T3262 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7704 gctacaaCGACCCCa CGGGGUCG m7b Disrupted HHFKP_21966_uc001lba.1_1_405
hsa-miR-616-3p gctaCAATGACccca AGUCAUUG m7b Created HHFKP_21966_uc001lba.1_1_405
hsa-miR-4289 gctACAATGacccca GCAUUGUG m6b Created HHFKP_21966_uc001lba.1_1_405

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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