SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000679
Gene Symbol: ADRA1B
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.159951152C>A COSN15322182 SNUH_G76_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6832-3p ggagctAAAAGGGTc ACCCUUUU m8a Created HHRBL_11821_BCBL1-2of3-SCL_13213
hsa-miR-6780b-3p ggagctACAAGGGtc UCCCUUGU m7b Disrupted HHRBL_11821_BCBL1-2of3-SCL_13213

Mutation Mutation ID Sample Name Cancer Type
chr5:g.159950924G>A COSN2080674 RK075_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7977 ctctCTGGGAAactg UUCCCAGC m7a Disrupted HHRBL_11820_BCBL1-2of3-SCL_15453
hsa-miR-4330 ctcTCTGAGaaactg CCUCAGAU m6b Created HHRBL_11820_BCBL1-2of3-SCL_15453

Mutation Mutation ID Sample Name Cancer Type
chr5:g.159950553C>T COSN15314103 SNUH_G76_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-10a-3p atgacaaCGAATTTg CAAAUUCG m7b Disrupted HHRBL_11819_BCBL1-2of3-SCL_1203
hsa-miR-4289 atgACAATGaatttg GCAUUGUG m6b Created HHRBL_11819_BCBL1-2of3-SCL_1203
hsa-miR-4760-3p atgacaATGAATTTg AAAUUCAU m8a Created HHRBL_11819_BCBL1-2of3-SCL_1203
hsa-miR-664a-3p atgacAATGAATttg UAUUCAUU m7b Created HHRBL_11819_BCBL1-2of3-SCL_1203
hsa-miR-6755-3p aTGACAACgaatttg UGUUGUCA m7b Disrupted HHRBL_11819_BCBL1-2of3-SCL_1203

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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