SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000632
Gene Symbol: ITGAM
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr16:g.31324329C>A COSN8601198 381_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4487 tcaaggcCCAGCTCc AGAGCUGG m7b Disrupted HPKMB_3145_G3575.1_31335649
hsa-miR-2861 tcaAGGCCCagctcc GGGGCCUG m6b Disrupted HPKMB_3145_G3575.1_31335649
hsa-miR-6889-3p tcaaGGCACAGctcc UCUGUGCC m7b Created HPKMB_3145_G3575.1_31335649
hsa-miR-550b-2-5p tcaAGGCACAgctcc AUGUGCCU m7b Created HPKMB_3145_G3575.1_31335649
hsa-miR-550a-5p tcaAGGCACagctcc AGUGCCUG m6b Created HPKMB_3145_G3575.1_31335649
hsa-miR-550a-3-5p tcaAGGCACagctcc AGUGCCUG m6b Created HPKMB_3145_G3575.1_31335649
hsa-miR-1271-3p tcaAGGCACagctcc AGUGCCUG m6b Created HPKMB_3145_G3575.1_31335649

Mutation Mutation ID Sample Name Cancer Type
chr16:g.31324322C>T COSN8601197 3584_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3139 ccAGCTCCTctgctt UAGGAGCU m7b (m7b->m6b) HPKMB_3145_G3575.1_31335649
hsa-miR-298 ccagctCTTCTGCTt AGCAGAAG m8a Created HPKMB_3145_G3575.1_31335649
hsa-miR-28-5p ccAGCTCCTctgctt AAGGAGCU m7b (m7b->m6b) HPKMB_3145_G3575.1_31335649
hsa-miR-2467-3p ccagctCCTCTGCTt AGCAGAGG m8a Disrupted HPKMB_3145_G3575.1_31335649
hsa-miR-708-5p ccAGCTCCTctgctt AAGGAGCU m7b (m7b->m6b) HPKMB_3145_G3575.1_31335649
hsa-miR-6847-5p ccagcTCCTCTGctt ACAGAGGA m7b Disrupted HPKMB_3145_G3575.1_31335649
hsa-miR-5197-3p ccagCTCTTCTgctt AAGAAGAG m7b Created HPKMB_3145_G3575.1_31335649

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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