SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000629
Gene Symbol: IFNAR1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr21:g.33358858A>T COSN7144865 8062308 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6083 atATATAAaacttag CUUAUAUC m6b Disrupted HPKTA_39183_G42148.1_34731171
hsa-miR-190a-3p atATATATAacttag CUAUAUAU m7b (m6b->m7b) HPKTA_39183_G42148.1_34731171
hsa-miR-5011-5p aTATATATAacttag UAUAUAUA m8a (m7a->m8a) HPKTA_39183_G42148.1_34731171

Mutation Mutation ID Sample Name Cancer Type
chr21:g.33358023C>G COSN6562019 ICGC_MB98 [central_nervous_system][brain][primitive_neuroectodermal_tumour-medulloblastoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-624-3p caatgcCCTTGTagg CACAAGGU m6b Disrupted HPKTA_39177_G42141.1_34730321
hsa-miR-4761-3p caATGCCCTtgtagg GAGGGCAU m7b (m7b->m6b) HPKTA_39177_G42141.1_34730321

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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