SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000587
Gene Symbol: C7
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.40964823G>C COSM1543996 TCGA-78-7155-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4435 acatCTGGCCActgg AUGGCCAG m7b Disrupted HPKMA_11691_G13640.1_40964913
hsa-miR-3677-5p acatctGGCCACTGg CAGUGGCC m8a Disrupted HPKMA_11691_G13640.1_40964913
hsa-miR-194-3p acatctgCCCACTGg CCAGUGGG m7b Created HPKMA_11691_G13640.1_40964913
hsa-miR-5693 acatctgGCCACTGg GCAGUGGC m7b Disrupted HPKMA_11691_G13640.1_40964913

Mutation Mutation ID Sample Name Cancer Type
chr5:g.40964819C>T COSM1068248 TCGA-BS-A0UV-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4435 CTGGCCATtgggttt AUGGCCAG m8a Created HPKMA_11691_G13640.1_40964913
hsa-miR-3677-5p ctGGCCACTGggttt CAGUGGCC m8a Disrupted HPKMA_11691_G13640.1_40964913
hsa-miR-3130-5p ctggccACTGGGTtt UACCCAGU m7b Disrupted HPKMA_11691_G13640.1_40964913
hsa-miR-5693 ctgGCCACTGggttt GCAGUGGC m7b Disrupted HPKMA_11691_G13640.1_40964913
hsa-miR-4482-5p ctggccACTGGGTTt AACCCAGU m8a Disrupted HPKMA_11691_G13640.1_40964913

Mutation Mutation ID Sample Name Cancer Type
chr5:g.40964810C>T COSM3616466 TCGA-EB-A44N-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3978 gggTTTCCAataaga GUGGAAAG m6b Disrupted HPKMA_11691_G13640.1_40964913
hsa-miR-4261 ggGTTTCCaataaga AGGAAACA m6b Disrupted HPKMA_11691_G13640.1_40964913

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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