SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000551
Gene Symbol: VHL
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.10151344A>G COSN1902142 RK092_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3660 tgcttCTGTCAGact ACUGACAG m7b Created HPKTB_7004_G8907.1_10193020
hsa-miR-4526 tgcttCTGTCAGact GCUGACAG m7b Created HPKTB_7004_G8907.1_10193020
hsa-miR-6730-3p tgcttcTGTCAGact CCUGACAC m6b Created HPKTB_7004_G8907.1_10193020

Mutation Mutation ID Sample Name Cancer Type
chr3:g.10151333T>G COSN9732284 C0065T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-183-3p ctcaAATTCAatgct GUGAAUUA m6b Disrupted HPKTB_7004_G8907.1_10193020
hsa-miR-33a-5p ctcaAATGCAatgct GUGCAUUG m6b Created HPKTB_7004_G8907.1_10193020
hsa-miR-33b-5p ctcaAATGCAatgct GUGCAUUG m6b Created HPKTB_7004_G8907.1_10193020

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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