SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000551
Gene Symbol: VHL
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.10150794A>G COSN2535352
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3912-5p agtattaATGGACAa AUGUCCAU m7b Disrupted HHRBL_9709_BCBL1-2of3-SCL_7004
hsa-miR-4436b-5p agtattAGTGGACaa GUCCACUU m7a Created HHRBL_9709_BCBL1-2of3-SCL_7004

Mutation Mutation ID Sample Name Cancer Type
chr3:g.10150789T>C COSN2535351
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-155-5p attatAGCATTAAtg UUAAUGCU m8a Created HHRBL_9709_BCBL1-2of3-SCL_7004
hsa-miR-200b-3p attatAGTATTAatg UAAUACUG m7a Disrupted HHRBL_9709_BCBL1-2of3-SCL_7004
hsa-miR-200c-3p attatAGTATTAatg UAAUACUG m7a Disrupted HHRBL_9709_BCBL1-2of3-SCL_7004
hsa-miR-374c-5p attataGTATTAatg AUAAUACA m6b Disrupted HHRBL_9709_BCBL1-2of3-SCL_7004
hsa-miR-429 attatAGTATTAatg UAAUACUG m7a Disrupted HHRBL_9709_BCBL1-2of3-SCL_7004
hsa-miR-625-3p atTATAGTattaatg GACUAUAG m6b Disrupted HHRBL_9709_BCBL1-2of3-SCL_7004
hsa-miR-655-3p attataGTATTAatg AUAAUACA m6b Disrupted HHRBL_9709_BCBL1-2of3-SCL_7004
hsa-miR-8084 attaTAGTATTaatg GAAUACUA m7b Disrupted HHRBL_9709_BCBL1-2of3-SCL_7004
hsa-miR-155-5p attatAGCATTAAtg UUAAUGCU m8a Created HHRBL_9709_BCBL1-2of3-SCL_7004
hsa-miR-200b-3p attatAGTATTAatg UAAUACUG m7a Disrupted HHRBL_9709_BCBL1-2of3-SCL_7004
hsa-miR-200c-3p attatAGTATTAatg UAAUACUG m7a Disrupted HHRBL_9709_BCBL1-2of3-SCL_7004
hsa-miR-374c-5p attataGTATTAatg AUAAUACA m6b Disrupted HHRBL_9709_BCBL1-2of3-SCL_7004
hsa-miR-429 attatAGTATTAatg UAAUACUG m7a Disrupted HHRBL_9709_BCBL1-2of3-SCL_7004
hsa-miR-625-3p atTATAGTattaatg GACUAUAG m6b Disrupted HHRBL_9709_BCBL1-2of3-SCL_7004
hsa-miR-655-3p attataGTATTAatg AUAAUACA m6b Disrupted HHRBL_9709_BCBL1-2of3-SCL_7004
hsa-miR-8084 attaTAGTATTaatg GAAUACUA m7b Disrupted HHRBL_9709_BCBL1-2of3-SCL_7004

Mutation Mutation ID Sample Name Cancer Type
chr3:g.10150786T>C COSN2535349
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1183 ttgatTACAGTatta CACUGUAG m6b Created HHRBL_9709_BCBL1-2of3-SCL_7004
hsa-miR-200b-3p ttgattaCAGTATTa UAAUACUG m7b Created HHRBL_9709_BCBL1-2of3-SCL_7004
hsa-miR-200c-3p ttgattaCAGTATTa UAAUACUG m7b Created HHRBL_9709_BCBL1-2of3-SCL_7004
hsa-miR-3607-3p ttgaTTACAGTatta ACUGUAAA m7a Created HHRBL_9709_BCBL1-2of3-SCL_7004
hsa-miR-429 ttgattaCAGTATTa UAAUACUG m7b Created HHRBL_9709_BCBL1-2of3-SCL_7004
hsa-miR-625-3p ttgatTATAGTatta GACUAUAG m6b Disrupted HHRBL_9709_BCBL1-2of3-SCL_7004
hsa-miR-8084 ttgattaTAGTATTa GAAUACUA m7b Disrupted HHRBL_9709_BCBL1-2of3-SCL_7004

Mutation Mutation ID Sample Name Cancer Type
chr3:g.10150785A>G COSN229630
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-625-3p tttgatTATAGTatt GACUAUAG m6b Disrupted HHRBL_9709_BCBL1-2of3-SCL_7004

Mutation Mutation ID Sample Name Cancer Type
chr3:g.10150784T>C COSN2535348
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-625-3p gtttgatTATAGTat GACUAUAG m6b Disrupted HHRBL_9709_BCBL1-2of3-SCL_7004
Mutation Mutation ID Sample Name Cancer Type
chr3:g.10150782A>C COSN1902139 RK061_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr3:g.10150781G>T COSN2535347
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-369-3p catgtttTATTATag AAUAAUAC m6b Created HHRBL_9709_BCBL1-2of3-SCL_7004
hsa-miR-374a-5p catgtttTATTATAg UUAUAAUA m7b Created HHRBL_9709_BCBL1-2of3-SCL_7004
hsa-miR-374b-5p catgtttTATTATAg AUAUAAUA m7b Created HHRBL_9709_BCBL1-2of3-SCL_7004
hsa-miR-5692b catgtttTATTATag AAUAAUAU m6b Created HHRBL_9709_BCBL1-2of3-SCL_7004
hsa-miR-5692c catgtttTATTATag AAUAAUAU m6b Created HHRBL_9709_BCBL1-2of3-SCL_7004
Mutation Mutation ID Sample Name Cancer Type
chr3:g.10150778T>C COSN2535346
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation Mutation ID Sample Name Cancer Type
chr3:g.10150776T>C COSN2535344
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr3:g.10150772T>C COSN2535342
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1290 gAAAATCCgcatgtt UGGAUUUU m7b Created HHRBL_9709_BCBL1-2of3-SCL_7004

Mutation Mutation ID Sample Name Cancer Type
chr3:g.10150768A>C COSN2535341
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4273 acGAGAACAtctgca GUGUUCUC m7b (m6b->m7b) HHRBL_9709_BCBL1-2of3-SCL_7004
hsa-miR-7156-5p acGAGAACAtctgca UUGUUCUC m7b (m6b->m7b) HHRBL_9709_BCBL1-2of3-SCL_7004

Mutation Mutation ID Sample Name Cancer Type
chr3:g.10150767A>G COSN2535340
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-10b-3p tacgagaGAATCTGc ACAGAUUC m7b Created HHRBL_9709_BCBL1-2of3-SCL_7004
hsa-miR-3615 taCGAGAGAatctgc UCUCUCGG m7a (m6a->m7a) HHRBL_9709_BCBL1-2of3-SCL_7004
hsa-miR-4768-5p tacGAGAGAATctgc AUUCUCUC m8a Created HHRBL_9709_BCBL1-2of3-SCL_7004
hsa-miR-6833-3p tacGAGAGAAtctgc UUUCUCUC m7b Created HHRBL_9709_BCBL1-2of3-SCL_7004

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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